RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 DNMT3AQ9Y6K1 912 aaPredicted RBP14.19□□□□□ -0.14
COL9A2-202ENST00000372748 THSD7BQ9C0I4 1608 aa14.19□□□□□ -0.14
COL9A2-202ENST00000372748 A0A0G2JMP0 313 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 EIF3FO00303 357 aaPredicted RBP14.18□□□□□ -0.14
COL9A2-202ENST00000372748 SOX14O95416 240 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 PCGF2P35227 344 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 TM4SF4P48230 202 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 SCN1BQ07699 218 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 XKR6Q5GH73 641 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 TPGS1Q6ZTW0 290 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 ARMCX6Q7L4S7 300 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 WDR53Q7Z5U6 358 aaPredicted RBP14.18□□□□□ -0.14
COL9A2-202ENST00000372748 KRT73Q86Y46 540 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 NPAS3Q8IXF0 933 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 C1orf52Q8N6N3 182 aaKnown RBP14.18□□□□□ -0.14
COL9A2-202ENST00000372748 OR5AK3PQ8NH89 298 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 DNAJC11Q9NVH1 559 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 CLN6Q9NWW5 311 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 YIPF1Q9Y548 306 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 TRBV5-4A0A0C4DH59 114 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 SCAMP2O15127 329 aaKnown RBP14.18□□□□□ -0.14
COL9A2-202ENST00000372748 MTX2O75431 263 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 CLEC2LP0C7M8 214 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 SRCP12931 536 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 MYL9P24844 172 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 PSMA1P25786 263 aaKnown RBP14.18□□□□□ -0.14
COL9A2-202ENST00000372748 CCL23P55773 120 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 B4GALNT1Q00973 533 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 VEPH1Q14D04 833 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 LIPKQ5VXJ0 399 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 SYCE2Q6PIF2 218 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 KLHL17Q6TDP4 642 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 GLCCI1Q86VQ1 547 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 SIX5Q8N196 739 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 AUTS2Q8WXX7 1259 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 ALG14Q96F25 216 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 SLC22A4Q9H015 551 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 SLA2Q9H6Q3 261 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 ACER3Q9NUN7 267 aa14.18□□□□□ -0.14
COL9A2-202ENST00000372748 PRAMEF33A0A0G2JMD5 474 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 A0A0X1KG70 313 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 GNG14A0A1W2PPG7 69 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 B4DXG7 233 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 PLD2O14939 933 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 PRAMEF10O60809 474 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 TMCC2O75069 709 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 SCG5P05408 212 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 ANXA4P09525 319 aaPredicted RBP14.17□□□□□ -0.14
COL9A2-202ENST00000372748 SLC6A12P48065 614 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 ZNF461Q8TAF7 563 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 OVCA2Q8WZ82 227 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 CAPNS2Q96L46 248 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 TOR4AQ9NXH8 423 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 SNX7Q9UNH6 387 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 PRRC2BQ5JSZ5 2229 aaKnown RBP14.17□□□□□ -0.14
COL9A2-202ENST00000372748 FAM25AB3EWG3 89 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 FAM25CB3EWG5 89 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 FAM25GB3EWG6 89 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 CSO75390 466 aaKnown RBP14.17□□□□□ -0.14
COL9A2-202ENST00000372748 CDRT1O95170 752 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 GADD45GO95257 159 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 CSF3P09919 207 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 JUPP14923 745 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 SPAM1P38567 509 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 CRYBB2P43320 205 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 PRIM2P49643 509 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 SNRPD2P62316 118 aaKnown RBP14.17□□□□□ -0.14
COL9A2-202ENST00000372748 SPHARQ15513 63 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 DEFB115Q30KQ5 88 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 ATP13A5Q4VNC0 1218 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 DNAJB7Q7Z6W7 309 aaPredicted RBP14.17□□□□□ -0.14
COL9A2-202ENST00000372748 TMEM150AQ86TG1 271 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 GPR65Q8IYL9 337 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 VPS37AQ8NEZ2 397 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 ADAMTS19Q8TE59 1207 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 DIRAS2Q96HU8 199 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 SLC12A9Q9BXP2 914 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 HCN4Q9Y3Q4 1203 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 CMAHPQ9Y471 501 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 MAP4K5Q9Y4K4 846 aa14.17□□□□□ -0.14
COL9A2-202ENST00000372748 NPIPB15A6NHN6 443 aaPredicted RBP14.16□□□□□ -0.14
COL9A2-202ENST00000372748 E7EQ34 232 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 PRRG1O14668 218 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 LRRTM2O43300 516 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 C1SP09871 688 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 NSG1P42857 185 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 P2RX3P56373 397 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 AP1S1P61966 158 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 HBA1P69905 142 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 SCARB2Q14108 478 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 TEAD4Q15561 434 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 FRMPD2BQ6IN97 320 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 SERPINA13PQ6UXR4 307 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 DEFB128Q7Z7B8 93 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 ABI3BPQ7Z7G0 1075 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 POLR2J2Q9GZM3 115 aaKnown RBP14.16□□□□□ -0.14
COL9A2-202ENST00000372748 A0A1W2PQL4 384 aaPredicted RBP14.16□□□□□ -0.14
COL9A2-202ENST00000372748 FABP12A6NFH5 140 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 AP2A2O94973 939 aa14.16□□□□□ -0.14
COL9A2-202ENST00000372748 HBQ1P09105 142 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms