RNA–Protein interactions for RNA: ENST00000372633.1

RAB40A-202, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB40A, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-202ENST00000372633 MBD1Q9UIS9 605 aaPredicted RBP13.13□□□□□ -0.31
RAB40A-202ENST00000372633 ENPP4Q9Y6X5 453 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 KIAA1671Q9BY89 1806 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 PRAMEF33A0A0G2JMD5 474 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 TFECO14948 347 aaPredicted RBP13.13□□□□□ -0.31
RAB40A-202ENST00000372633 SMAD6O43541 496 aaKnown RBP13.13□□□□□ -0.31
RAB40A-202ENST00000372633 TPST2O60704 377 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 PRAMEF10O60809 474 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 CYP17A1P05093 508 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 ANXA4P09525 319 aaPredicted RBP13.13□□□□□ -0.31
RAB40A-202ENST00000372633 CSF3P09919 207 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 RHCEP18577 417 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 HLA-DMAP28067 261 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 PCBP3P57721 371 aaKnown RBP13.13□□□□□ -0.31
RAB40A-202ENST00000372633 RUNX1T1Q06455 604 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 ATP13A5Q4VNC0 1218 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 PLEKHS1Q5SXH7 462 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 GDPD1Q8N9F7 314 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 IL17RCQ8NAC3 791 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 CREB3L4Q8TEY5 395 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 KLHL6Q8WZ60 621 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 MED30Q96HR3 178 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 BHLHE41Q9C0J9 482 aaPredicted RBP13.13□□□□□ -0.31
RAB40A-202ENST00000372633 C11orf54Q9H0W9 315 aaPredicted RBP13.13□□□□□ -0.31
RAB40A-202ENST00000372633 MIXL1Q9H2W2 232 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 CLEC2DQ9UHP7 191 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 KCND3Q9UK17 655 aa13.13□□□□□ -0.31
RAB40A-202ENST00000372633 C2orf78A6NCI8 922 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 NPIPB15A6NHN6 443 aaPredicted RBP13.12□□□□□ -0.31
RAB40A-202ENST00000372633 ERVH48-1M5A8F1 160 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 TBL1XO60907 577 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 RECKO95980 971 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 IL1AP01583 271 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 HBQ1P09105 142 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 MYL9P24844 172 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 AZGP1P25311 298 aaKnown RBP13.12□□□□□ -0.31
RAB40A-202ENST00000372633 CSKP41240 450 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 MAPK8P45983 427 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 HBA1P69905 142 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 DOC2AQ14183 400 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 XKR6Q5GH73 641 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 GRHL2Q6ISB3 625 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 CRTC1Q6UUV9 634 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 CACTIN-AS1Q8N1I8 211 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 CLDN22Q8N7P3 220 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 NANOGP1Q8N7R0 232 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 NFKBIDQ8NI38 313 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 REPS1Q96D71 796 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 TMEM80Q96HE8 168 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 MND1Q9BWT6 205 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 RNF121Q9H920 327 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 NMNAT1Q9HAN9 279 aaPredicted RBP13.12□□□□□ -0.31
RAB40A-202ENST00000372633 MARCH5Q9NX47 278 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 FADS2P1A8MWK0 482 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 GKP32189 559 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 BNC1Q01954 994 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 MLLT11Q13015 90 aaPredicted RBP13.12□□□□□ -0.31
RAB40A-202ENST00000372633 ZNF385BQ569K4 471 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 RTP2Q5QGT7 225 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 DDX53Q86TM3 631 aaKnown RBP13.12□□□□□ -0.31
RAB40A-202ENST00000372633 PROKR2Q8NFJ6 384 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 TTC9Q92623 222 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 KIAA1143Q96AT1 154 aaPredicted RBP13.12□□□□□ -0.31
RAB40A-202ENST00000372633 VPS35Q96QK1 796 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 REV1Q9UBZ9 1251 aa13.12□□□□□ -0.31
RAB40A-202ENST00000372633 IFNA14P01570 189 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 CKMT1AP12532 417 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 P2RX3P56373 397 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 TAB1Q15750 504 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 SPIN4Q56A73 249 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 TIGD3Q6B0B8 471 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 HJURPQ8NCD3 748 aaPredicted RBP13.11□□□□□ -0.31
RAB40A-202ENST00000372633 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.11□□□□□ -0.31
RAB40A-202ENST00000372633 ZFAND1Q8TCF1 268 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 SKA2Q8WVK7 121 aaPredicted RBP13.11□□□□□ -0.31
RAB40A-202ENST00000372633 VOPP1Q96AW1 172 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 FRMD6Q96NE9 622 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 ABCB9Q9NP78 766 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 RPRD1BQ9NQG5 326 aaKnown RBP13.11□□□□□ -0.31
RAB40A-202ENST00000372633 A8MX80 341 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 E7EQ34 232 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 IRF1P10914 325 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 ERP29P30040 261 aaKnown RBP13.11□□□□□ -0.31
RAB40A-202ENST00000372633 TGM4P49221 684 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 CDK6Q00534 326 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 TRIM60Q495X7 471 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 DGKKQ5KSL6 1271 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 ZNF648Q5T619 568 aaPredicted RBP13.11□□□□□ -0.31
RAB40A-202ENST00000372633 THOC6Q86W42 341 aaKnown RBP13.11□□□□□ -0.31
RAB40A-202ENST00000372633 PHC2Q8IXK0 858 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 KLHDC8AQ8IYD2 350 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 OXR1Q8N573 874 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 WFDC5Q8TCV5 224 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 ZFYVE19Q96K21 471 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 SLC35A5Q9BS91 424 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 ANAPC1Q9H1A4 1944 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 PLEKHB1Q9UF11 243 aaPredicted RBP13.11□□□□□ -0.31
RAB40A-202ENST00000372633 KLHL21Q9UJP4 597 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 SSR3Q9UNL2 185 aa13.11□□□□□ -0.31
RAB40A-202ENST00000372633 HELZP42694 1942 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms