RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 PTPN2P17706 415 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 UQCRC2P22695 453 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 GADD45AP24522 165 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 CD97P48960 835 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 CLDN8P56748 225 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 KLHL26Q53HC5 615 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 PLEKHS1Q5SXH7 462 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 DCDC5Q6ZRR9 648 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 YIPF7Q8N8F6 280 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 FRS2Q8WU20 508 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 DPH2Q9BQC3 489 aaPredicted RBP16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 SPATA9Q9BWV2 254 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 RBMXL2O75526 392 aaKnown RBP16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 ALAS2P22557 587 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 NRIP1P48552 1158 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 TFGQ92734 400 aaPredicted RBP16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 COQ8BQ96D53 544 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 TP63Q9H3D4 680 aaPredicted RBP16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 IGSF5Q9NSI5 407 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 RIMS3Q9UJD0 308 aa16.52■□□□□ 0.23
PTP4A1-201ENST00000370651 NALCNQ8IZF0 1738 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 DNASE1P24855 282 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 MAN2A2P49641 1150 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 NUP54Q7Z3B4 507 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 PIWIL3Q7Z3Z3 882 aaKnown RBP16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 OR52E4Q8NGH9 312 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 TRIB3Q96RU7 358 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 HAPLN2Q9GZV7 340 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 GPR83Q9NYM4 423 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 IL36AQ9UHA7 158 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 GNG8Q9UK08 70 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 NDUFS4O43181 175 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 EEF1E1O43324 174 aaKnown RBP16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 VAMP1P23763 118 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 PGDP52209 483 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 TSC22D1Q15714 1073 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 SLC35F1Q5T1Q4 408 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 ACOT12Q8WYK0 555 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 NENFQ9UMX5 172 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 STUB1Q9UNE7 303 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 NOP16Q9Y3C1 178 aaKnown RBP16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 ZNF670-ZNF695F2Z2N8 137 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 H7C2Y5 167 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 SLC31A1O15431 190 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 NOVP48745 357 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 ARFRP1Q13795 201 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 SNAP47Q5SQN1 464 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 GARNL3Q5VVW2 1013 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 TXNDC8Q6A555 127 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 IFNLR1Q8IU57 520 aaPredicted RBP16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 SHKBP1Q8TBC3 707 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 ABCG5Q9H222 651 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 IFT52Q9Y366 437 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 ZBTB48P10074 688 aaPredicted RBP16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 DCTP40126 519 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 PREPP48147 710 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 CLCNKAP51800 687 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 MLLT10P55197 1068 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 MLLT1Q03111 559 aaPredicted RBP16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 PSAPL1Q6NUJ1 521 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 ADGRG5Q8IZF4 528 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 DTWD1Q8N5C7 304 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 RPLP0P6Q8NHW5 317 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 GAB3Q8WWW8 586 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 TMEM125Q96AQ2 219 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 TRIM43Q96BQ3 446 aaPredicted RBP16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 PCTPQ9UKL6 214 aa16.51■□□□□ 0.23
PTP4A1-201ENST00000370651 A0A1W2PRU2 124 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 HOXD8P13378 290 aaPredicted RBP16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 IL12BP29460 328 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 HTR2BP41595 481 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 MAGEA6P43360 314 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 NFE2L1Q14494 772 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 VITQ6UXI7 678 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 TMEM17Q86X19 198 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 TMEM151AQ8N4L1 468 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 TMEM145Q8NBT3 493 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 WFIKKN2Q8TEU8 576 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 MCHR1Q99705 422 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 EMCNQ9ULC0 261 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 HTR3EA5X5Y0 456 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 UPK3BL1B0FP48 263 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 UPK3BL2E5RIL1 263 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 HMGB3O15347 200 aaKnown RBP16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 UBXN7O94888 489 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 PGAM2P15259 253 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 GPR17Q13304 367 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 SLC25A25Q6KCM7 469 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 VTCN1Q7Z7D3 282 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 ZNF227Q86WZ6 799 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 MFSD2AQ8NA29 543 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 SLC22A18Q96BI1 424 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 SLC30A3Q99726 388 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 ENPP5Q9UJA9 477 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 TLL1O43897 1013 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 RP2O75695 350 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 TFAP2AP05549 437 aa16.5■□□□□ 0.23
PTP4A1-201ENST00000370651 TIA1P31483 386 aaKnown RBP eCLIP16.5■□□□□ 0.233e-7■■■■■ 50.7
PTP4A1-201ENST00000370651 MAGEA12P43365 314 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms