RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 PCDHB16Q9NRJ7 776 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 APOC3P02656 99 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 GP1BBP13224 206 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 IL7P13232 177 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 ACP5P13686 325 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 CBLP22681 906 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 PRKAR1BP31321 381 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 CDKN2CP42773 168 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 CYBRD1Q53TN4 286 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 ARHGAP12Q8IWW6 846 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 NEIL3Q8TAT5 605 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 TCEAL4Q96EI5 215 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 C7orf34Q96L11 122 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 METTL7AQ9H8H3 244 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 ZNF358Q9NW07 568 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 PCDHGA8Q9Y5G5 932 aa12.05□□□□□ -0.48
HCFC1-202ENST00000369984 TMEM131LA2VDJ0 1609 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 BCL9O00512 1426 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 TCRBV7S3A2A0A539 114 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 YJEFN3A6XGL0 299 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 HAS3O00219 553 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 HRGP04196 525 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 NKX6-1P78426 367 aaPredicted RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 BCL2A1Q16548 175 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 DCST2Q5T1A1 773 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 LIPKQ5VXJ0 399 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 ZNF584Q8IVC4 421 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 GNPDA2Q8TDQ7 276 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 TMEM246Q9BRR3 403 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 FN3KQ9H479 309 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 HEATR1Q9H583 2144 aaKnown RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 CERS4Q9HA82 394 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 TMEM184CQ9NVA4 438 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 CDC14AQ9UNH5 594 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 ST14Q9Y5Y6 855 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 A8MT66 165 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 POLR1CO15160 346 aaPredicted RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 CAPN5O15484 640 aaPredicted RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 FLRT2O43155 660 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 ZNF254O75437 659 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 ALPIP09923 528 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 AOC1P19801 751 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 NRIP1P48552 1158 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 POLR2HP52434 150 aaKnown RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 FGL1Q08830 312 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 GID4Q8IVV7 300 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 TMEM45AQ9NWC5 275 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 COQ3Q9NZJ6 369 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 HTR2AP28223 471 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 NR0B1P51843 470 aaKnown RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 HADHBP55084 474 aaKnown RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 ABRAXAS2Q15018 415 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 SLC35F1Q5T1Q4 408 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 Q8N402 240 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 OR56A1Q8NGH5 318 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 OR13C3Q8NGS6 347 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 TSSK6Q9BXA6 273 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 BIN3Q9NQY0 253 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 NOCTQ9UK39 431 aaKnown RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 IL3P08700 152 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 F7P08709 466 aaPredicted RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 HOXD8P13378 290 aaPredicted RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 RPL10P27635 214 aaKnown RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 CCDC58Q4VC31 144 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 LRRTM4Q86VH4 590 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 ZNF420Q8TAQ5 688 aaPredicted RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 TCTEX1D2Q8WW35 142 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 TMEM74Q96NL1 305 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 DKKL1Q9UK85 242 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 ZNF705GA8MUZ8 300 aaPredicted RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 GRXCR1A8MXD5 290 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 CXorf49A8MYA2 514 aaPredicted RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 EEF1E1O43324 174 aaKnown RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 ENTPD1P49961 510 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 TGFBIQ15582 683 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 NPAS4Q8IUM7 802 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 OR8K3Q8NH51 312 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 TPT1P8Q9HAU6 139 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 MRPS17Q9Y2R5 130 aaKnown RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 A8MU76 341 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 GRIK2Q13002 908 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 TMEM236Q5W0B7 351 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 ARL14Q8N4G2 192 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 FAM86B1Q8N7N1 296 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 PHOX2BQ99453 314 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 SUV39H2Q9H5I1 410 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 ZNF701Q9NV72 531 aaPredicted RBP12.04□□□□□ -0.48
HCFC1-202ENST00000369984 TAC3Q9UHF0 121 aa12.04□□□□□ -0.48
HCFC1-202ENST00000369984 UGT2B10P36537 528 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 GSK3BP49841 420 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 CLCNKAP51800 687 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 TCEANCQ8N8B7 351 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 BIRC7Q96CA5 298 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 MALSU1Q96EH3 234 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 PREBQ9HCU5 417 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 Q9N2J8 555 aa12.03□□□□□ -0.48
HCFC1-202ENST00000369984 EXOSC1Q9Y3B2 195 aaKnown RBP12.03□□□□□ -0.48
HCFC1-202ENST00000369984 TFPTP0C1Z6 253 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms