RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 EMCNQ9ULC0 261 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 FKBP7Q9Y680 259 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 RNF215Q9Y6U7 377 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 FBN2P35556 2912 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 CLDN24A6NM45 220 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 EFSO43281 561 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 PRKD3O94806 890 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 PRSS23O95084 383 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 POP4O95707 220 aaKnown RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 SNAP29O95721 258 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 APOC1P02654 83 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 PRKCGP05129 697 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 NELFEP18615 380 aaKnown RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 NFKB1P19838 968 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 CBLP22681 906 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 GKP32189 559 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 MAPK12P53778 367 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 AP1S1P61966 158 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 GRM3Q14832 879 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 USP39Q53GS9 565 aaKnown RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 SYT6Q5T7P8 510 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 MED25Q71SY5 747 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 ASPGQ86U10 573 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF567Q8N184 647 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 POC5Q8NA72 575 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 PROX1Q92786 737 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF285Q96NJ3 590 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 SPNS1Q9H2V7 528 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 CATSPERBQ9H7T0 1116 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 WDR41Q9HAD4 459 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 POLE4Q9NR33 117 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 RBM22Q9NW64 420 aaKnown RBP eCLIP6.58□□□□□ -1.367e-6■■■■□ 24.6
CSDE1-204ENST00000369530 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 OPTCQ9UBM4 332 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 MARCOQ9UEW3 520 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 RNF112Q9ULX5 631 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 SNX8Q9Y5X2 465 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 OAS3Q9Y6K5 1087 aaKnown RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 A0A1W2PP55 124 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 PRAMEF26H0Y7S4 382 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 ANGPT2O15123 496 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 ZBTB24O43167 697 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 SERPINI2O75830 405 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 TRIM16O95361 564 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 HPRP00739 348 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 ERVK-10P10266 1014 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 SLC1A6P48664 564 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 AFF3P51826 1226 aaKnown RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 RGS1Q08116 209 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 CDH17Q12864 832 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 GRB7Q14451 532 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 ARSIQ5FYB1 569 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 CLLU1Q5K131 121 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 FAM45BPQ6NSW5 357 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 LRRC56Q8IYG6 542 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 CELF2-AS1Q8N7Q2 184 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 OR5T2Q8NGG2 359 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 CDC26Q8NHZ8 85 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 FAM45AQ8TCE6 357 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 CCDC120Q96HB5 630 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 ROGDIQ9GZN7 287 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 COG4Q9H9E3 785 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 POLE3Q9NRF9 147 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 SMPD3Q9NY59 655 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-204ENST00000369530 TMEM181Q9P2C4 612 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 SLC17A6Q9P2U8 582 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 MKLN1Q9UL63 735 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 MAN2B2Q9Y2E5 1009 aa6.58□□□□□ -1.36
CSDE1-204ENST00000369530 ASCC3Q8N3C0 2202 aaKnown RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 RPS10-NUDT3A0A1W2PQS6 291 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 H0Y8X5 98 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 SCAMP1O15126 338 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 BNIP3LO60238 219 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 VAPBO95292 243 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 EML2O95834 649 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 FGF1P05230 155 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 POLBP06746 335 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 CELA2BP08218 269 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 SDHBP21912 280 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ALAS2P22557 587 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 MAXP61244 160 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 RPP38P78345 283 aaKnown RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 IRF4Q15306 451 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 AANATQ16613 207 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ALG11Q2TAA5 492 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 HKDC1Q2TB90 917 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 LINGO4Q6UY18 593 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 OVCH2Q7RTZ1 564 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 TMEFF1Q8IYR6 380 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 HTRA1Q92743 480 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 CENPNQ96H22 339 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 OR52B2Q96RD2 323 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 CITED4Q96RK1 184 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 SDHCQ99643 169 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 MECRQ9BV79 373 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 BTBD1Q9H0C5 482 aa6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF395Q9H8N7 513 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-204ENST00000369530 ZBTB26Q9HCK0 441 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms