RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 PRAMEF2O60811 474 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 WBP4O75554 376 aaKnown RBP9.47□□□□□ -0.89
SCAF11-202ENST00000369367 GDF5P43026 501 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 PPP2R2BQ00005 443 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 NOXRED1Q6NXP6 359 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 USP30Q70CQ3 517 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 TMEM135Q86UB9 458 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 HPS6Q86YV9 775 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 KLHL36Q8N4N3 616 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 CHST14Q8NCH0 376 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 SERINC2Q96SA4 455 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 CENPMQ9NSP4 180 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 MYH7P12883 1935 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 EFNA1P20827 205 aaPredicted RBP9.47□□□□□ -0.89
SCAF11-202ENST00000369367 ZNF542PQ5EBM4 170 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 GALNT5Q7Z7M9 940 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 OR56A3Q8NH54 315 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 SEC14L1Q92503 715 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 CSTBP04080 98 aaKnown RBP9.47□□□□□ -0.89
SCAF11-202ENST00000369367 QPRTQ15274 297 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 SHHQ15465 462 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 B3GNT6Q6ZMB0 384 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 SGCDQ92629 289 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 DCUN1D5Q9BTE7 237 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 MCUBQ9NWR8 336 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 ZNF451Q9Y4E5 1061 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 SLX4Q8IY92 1834 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 CCDC182A6NF36 153 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 CPSF4LA6NMK7 179 aaKnown RBP9.47□□□□□ -0.89
SCAF11-202ENST00000369367 K7ERQ8 282 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 SDC3O75056 442 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 EMP2P54851 167 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 CLRN1P58418 232 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 FOLH1Q04609 750 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 SLC5A9Q2M3M2 681 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 ARSJQ5FYB0 599 aaPredicted RBP9.47□□□□□ -0.89
SCAF11-202ENST00000369367 OR4C11Q6IEV9 310 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 PDZD3Q86UT5 571 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 TMEM17Q86X19 198 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 ZFAND4Q86XD8 727 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 OR2L5Q8NG80 312 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 TMEM174Q8WUU8 243 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 FBXL8Q96CD0 374 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 CHID1Q9BWS9 393 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 SACM1LQ9NTJ5 587 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 MKS1Q9NXB0 559 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 TVP23BQ9NYZ1 205 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 EDARQ9UNE0 448 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 WASF3Q9UPY6 502 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 PMS2P3Q13401 168 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 DSG2Q14126 1118 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 DUSP6Q16828 381 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 ALG1LQ6GMV1 187 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 MSANTD1Q6ZTZ1 278 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 NUP43Q8NFH3 380 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 MYRFLQ96LU7 910 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 MAP3K3Q99759 626 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 PRRX2Q99811 253 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 ORAI3Q9BRQ5 295 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 IFT46Q9NQC8 304 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 POU2F3Q9UKI9 436 aa9.47□□□□□ -0.89
SCAF11-202ENST00000369367 EFCAB9A8MZ26 197 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 SOX1O00570 391 aaPredicted RBP9.46□□□□□ -0.89
SCAF11-202ENST00000369367 GNB5O14775 395 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 ITIH1P19827 911 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 EFR3AQ14156 821 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 DCAF12L1Q5VU92 463 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 PPP1R3BQ86XI6 285 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 CEP97Q8IW35 865 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 TTC9BQ8N6N2 239 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 CHCHD6Q9BRQ6 235 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 BHLHE41Q9C0J9 482 aaPredicted RBP9.46□□□□□ -0.89
SCAF11-202ENST00000369367 EVA1AQ9H8M9 152 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 ZNF879B4DU55 563 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 M0QX08 132 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 CLUP10909 449 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 GABRA3P34903 492 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 ERVFC1P60507 584 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 PNCKQ6P2M8 343 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 MEIOBQ8N635 442 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 FAM47BQ8NA70 645 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 OR5AK3PQ8NH89 298 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 SLC12A9Q9BXP2 914 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 HSD3B7Q9H2F3 369 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 ACSS2Q9NR19 701 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 GRXCR1A8MXD5 290 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 RAB36O95755 333 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 GSTT2BP0CG30 244 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 HOXD8P13378 290 aaPredicted RBP9.46□□□□□ -0.89
SCAF11-202ENST00000369367 GADD45AP24522 165 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 MAPK3P27361 379 aaPredicted RBP9.46□□□□□ -0.89
SCAF11-202ENST00000369367 OR2T5Q6IEZ7 315 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 LGI4Q8N135 537 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 OR2T29Q8NH02 315 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 ADAD1Q96M93 576 aaKnown RBP9.46□□□□□ -0.89
SCAF11-202ENST00000369367 SCGB3A2Q96PL1 93 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 CD320Q9NPF0 282 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 NXT1Q9UKK6 140 aaKnown RBP9.46□□□□□ -0.89
SCAF11-202ENST00000369367 SATB2Q9UPW6 733 aa9.46□□□□□ -0.89
SCAF11-202ENST00000369367 FAM227AF5H4B4 570 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms