RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 FAM58BPP0C7Q3 252 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 ATP5A1P25705 553 aaKnown RBP18.48■□□□□ 0.55
CHTOP-204ENST00000368694 CERS1P27544 350 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 GSTM5P46439 218 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 ARFIP1P53367 373 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 SLAMF1Q13291 335 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 TRIM25Q14258 630 aaKnown RBP18.48■□□□□ 0.55
CHTOP-204ENST00000368694 MUM1Q2TAK8 710 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 DEFB110Q30KQ9 67 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 LRIF1Q5T3J3 769 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 TICAM1Q8IUC6 712 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 Q8N9G6 341 aaPredicted RBP18.48■□□□□ 0.55
CHTOP-204ENST00000368694 THUMPD3Q9BV44 507 aaKnown RBP18.48■□□□□ 0.55
CHTOP-204ENST00000368694 ALG2Q9H553 416 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 CAPN10Q9HC96 672 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 FAM60AQ9NP50 221 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 TEX10Q9NXF1 929 aaPredicted RBP18.48■□□□□ 0.55
CHTOP-204ENST00000368694 GMPR2Q9P2T1 348 aaKnown RBP18.48■□□□□ 0.55
CHTOP-204ENST00000368694 KLHL3Q9UH77 587 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 NEUROG3Q9Y4Z2 214 aa18.48■□□□□ 0.55
CHTOP-204ENST00000368694 PCDH15Q96QU1 1955 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 YKT6O15498 198 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 SCN2BO60939 215 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 DDCP20711 480 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 TSFMP43897 325 aaKnown RBP18.47■□□□□ 0.55
CHTOP-204ENST00000368694 VSX2P58304 361 aaPredicted RBP18.47■□□□□ 0.55
CHTOP-204ENST00000368694 BTN3A2P78410 334 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 MS4A2Q01362 244 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 SELPLGQ14242 412 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 AMZ1Q400G9 498 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 KANSL1Q7Z3B3 1105 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 MSRB3Q8IXL7 192 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 OR8J3Q8NGG0 315 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 CIDECQ96AQ7 238 aaPredicted RBP18.47■□□□□ 0.55
CHTOP-204ENST00000368694 ZDHHC12Q96GR4 267 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 PIF1Q9H611 641 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 RNPEPL1Q9HAU8 725 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 PADI4Q9UM07 663 aa18.47■□□□□ 0.55
CHTOP-204ENST00000368694 NUP214P35658 2090 aaPredicted RBP18.47■□□□□ 0.55
CHTOP-204ENST00000368694 ARID1BQ8NFD5 2236 aaPredicted RBP18.47■□□□□ 0.55
CHTOP-204ENST00000368694 IGHV1OR21-1A0A087WYE8 117 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 TLCD2A6NGC4 264 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 DUX1O43812 170 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 CCT8P50990 548 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 TRA2BP62995 288 aaKnown RBP18.46■□□□□ 0.55
CHTOP-204ENST00000368694 LIPEQ05469 1076 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 CCNIQ14094 377 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 SUZ12Q15022 739 aaKnown RBP18.46■□□□□ 0.55
CHTOP-204ENST00000368694 BHLHE22Q8NFJ8 381 aaPredicted RBP18.46■□□□□ 0.55
CHTOP-204ENST00000368694 OR2I1PQ8NGU4 316 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 OR4C6Q8NH72 309 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 SLC26A7Q8TE54 656 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 UTP15Q8TED0 518 aaKnown RBP18.46■□□□□ 0.55
CHTOP-204ENST00000368694 JADE3Q92613 823 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 AURKBQ96GD4 344 aaPredicted RBP18.46■□□□□ 0.55
CHTOP-204ENST00000368694 NAF1Q96HR8 494 aaKnown RBP18.46■□□□□ 0.55
CHTOP-204ENST00000368694 KCTD14Q9BQ13 255 aaPredicted RBP18.46■□□□□ 0.55
CHTOP-204ENST00000368694 ECSITQ9BQ95 431 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 SOHLH2Q9NX45 425 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 BCAP29Q9UHQ4 241 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 GMEB2Q9UKD1 530 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 SLC6A14Q9UN76 642 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 FRYLO94915 3013 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 KMT2EQ8IZD2 1858 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 RNASET2O00584 256 aaKnown RBP18.46■□□□□ 0.55
CHTOP-204ENST00000368694 KRT36O76013 467 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 STAMBPO95630 424 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 HSD17B1P14061 328 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 GPR3P46089 330 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 TRPC1P48995 793 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 NDUFAF5Q5TEU4 345 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 ZNF621Q6ZSS3 439 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 ABHD13Q7L211 337 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 CSNK1A1LQ8N752 337 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 TCTN2Q96GX1 697 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 CCDC115Q96NT0 180 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 SH3GL1Q99961 368 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 NLNQ9BYT8 704 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 BTNL2Q9UIR0 455 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 FBXW2Q9UKT8 454 aa18.46■□□□□ 0.55
CHTOP-204ENST00000368694 ZSCAN9O15535 394 aaPredicted RBP18.45■□□□□ 0.54
CHTOP-204ENST00000368694 PSMG1O95456 288 aa18.45■□□□□ 0.54
CHTOP-204ENST00000368694 CER1O95813 267 aa18.45■□□□□ 0.54
CHTOP-204ENST00000368694 LMNAP02545 664 aaKnown RBP18.45■□□□□ 0.54
CHTOP-204ENST00000368694 ABCB1P08183 1280 aaPredicted RBP18.45■□□□□ 0.54
CHTOP-204ENST00000368694 SOX11P35716 441 aa18.45■□□□□ 0.54
CHTOP-204ENST00000368694 MLLT3P42568 568 aaPredicted RBP18.45■□□□□ 0.54
CHTOP-204ENST00000368694 GSK3BP49841 420 aa18.45■□□□□ 0.54
CHTOP-204ENST00000368694 EEFSECP57772 596 aaKnown RBP18.45■□□□□ 0.54
CHTOP-204ENST00000368694 COL9A2Q14055 689 aaPredicted RBP18.45■□□□□ 0.54
CHTOP-204ENST00000368694 SPATS1Q496A3 300 aa18.45■□□□□ 0.54
CHTOP-204ENST00000368694 RUNDC3AQ59EK9 446 aa18.45■□□□□ 0.54
CHTOP-204ENST00000368694 ZC3H12BQ5HYM0 836 aaKnown RBP18.45■□□□□ 0.54
CHTOP-204ENST00000368694 FAM180BQ6P0A1 224 aa18.45■□□□□ 0.54
CHTOP-204ENST00000368694 SLC23A3Q6PIS1 610 aa18.45■□□□□ 0.54
CHTOP-204ENST00000368694 ZCCHC7Q8N3Z6 543 aaKnown RBP18.45■□□□□ 0.54
CHTOP-204ENST00000368694 OR4A15Q8NGL6 344 aa18.45■□□□□ 0.54
CHTOP-204ENST00000368694 FAIM2Q9BWQ8 316 aa18.45■□□□□ 0.54
CHTOP-204ENST00000368694 GTPBP2Q9BX10 602 aaKnown RBP18.45■□□□□ 0.54
CHTOP-204ENST00000368694 RAB33BQ9H082 229 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms