RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 IGHV3-20A0A0C4DH32 117 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 SAP18O00422 153 aaKnown RBP21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 COPEO14579 308 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 B3GALT2O43825 422 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 B4GALT2O60909 372 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 SUPT7LO94864 414 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 ETHE1O95571 254 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 JAK1P23458 1154 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 ATP5A1P25705 553 aaKnown RBP21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 PGDP52209 483 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 ABRAXAS2Q15018 415 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 CCDC153Q494R4 210 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 QSOX2Q6ZRP7 698 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 CPEB2Q7Z5Q1 589 aaKnown RBP21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 SRFBP1Q8NEF9 429 aaKnown RBP21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 TRPC4APQ8TEL6 797 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 REPS1Q96D71 796 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 TBCDQ9BTW9 1192 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 PSD3Q9NYI0 1048 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 KCMF1Q9P0J7 381 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 DAPP1Q9UN19 280 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 PCDHGB7Q9Y5F8 929 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 A0A088AWK7 358 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 FOXE1O00358 373 aaPredicted RBP21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 SCELO95171 688 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 OTCP00480 354 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 CELA2AP08217 269 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 ZNF10P21506 573 aaPredicted RBP21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 ITGA3P26006 1051 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 ARL1P40616 181 aaPredicted RBP21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 HNRNPFP52597 415 aaKnown RBP21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 LIM2P55344 173 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 RAB38P57729 211 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 TGM3Q08188 693 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 NSDHLQ15738 373 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 ACOT4Q8N9L9 421 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 BANPQ8N9N5 519 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 TMEM52Q8NDY8 209 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 MTFMTQ96DP5 389 aaKnown RBP21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 SORBS1Q9BX66 1292 aaKnown RBP21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 ZNF717Q9BY31 904 aaPredicted RBP21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 COPS7BQ9H9Q2 264 aaPredicted RBP21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 MKS1Q9NXB0 559 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 PPT2Q9UMR5 302 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 ZNF451Q9Y4E5 1061 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 CLDN16Q9Y5I7 305 aa21.1■□□□□ 0.97
ECHDC1-203ENST00000368291 CNTRLQ7Z7A1 2325 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 IGKV3D-11A0A0A0MRZ8 115 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 PSMD12O00232 456 aaPredicted RBP21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 CYR61O00622 381 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 PLPP1O14494 284 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 OR4F21O95013 312 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 MYL2P10916 166 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 ZNF844Q08AG5 666 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 VWA5B1Q5TIE3 1220 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 FRG2Q64ET8 278 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 PPP4R1Q8TF05 950 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 PSMF1Q92530 271 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 THOC3Q96J01 351 aaKnown RBP21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 FRG2BQ96QU4 278 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 CSF3RQ99062 836 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 LHPPQ9H008 270 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 GSTO2Q9H4Y5 243 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 ZBTB20Q9HC78 741 aaPredicted RBP21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 NECTIN3Q9NQS3 549 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 RIC8BQ9NVN3 520 aa21.09■□□□□ 0.97
ECHDC1-203ENST00000368291 SUV39H1O43463 412 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 PRMT3O60678 531 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 SEC24DO94855 1032 aaPredicted RBP21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 PRR35P0CG20 571 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 MAOAP21397 527 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 HIST1H1TP22492 207 aaPredicted RBP21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 PTX3P26022 381 aaPredicted RBP21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 CUL3Q13618 768 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 SFT2D3Q587I9 215 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 COLEC12Q5KU26 742 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 OR4C11Q6IEV9 310 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 SCUBE1Q8IWY4 988 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 IQCKQ8N0W5 287 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 FAM47BQ8NA70 645 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 MYRIPQ8NFW9 859 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 RGMAQ96B86 450 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 CCDC126Q96EE4 140 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 APOPT1Q96IL0 206 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 PTCHD1Q96NR3 888 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 ZNF382Q96SR6 550 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 MAPKAP1Q9BPZ7 522 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 ROGDIQ9GZN7 287 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 FARSBQ9NSD9 589 aaKnown RBP21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 C5AR2Q9P296 337 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 C19orf25Q9UFG5 118 aaPredicted RBP21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 TRPS1Q9UHF7 1281 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 PLLPQ9Y342 182 aa21.08■□□□□ 0.96
ECHDC1-203ENST00000368291 TGFBR3LH3BV60 316 aa21.07■□□□□ 0.96
ECHDC1-203ENST00000368291 CREB1P16220 341 aa21.07■□□□□ 0.96
ECHDC1-203ENST00000368291 BSGP35613 385 aa21.07■□□□□ 0.96
ECHDC1-203ENST00000368291 SSR2P43308 183 aa21.07■□□□□ 0.96
ECHDC1-203ENST00000368291 ARFIP1P53367 373 aa21.07■□□□□ 0.96
ECHDC1-203ENST00000368291 PHEXP78562 749 aa21.07■□□□□ 0.96
ECHDC1-203ENST00000368291 AP5B1Q2VPB7 878 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms