RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 OTUB2Q96DC9 234 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 PEX11GQ96HA9 241 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 ACTL8Q9H568 366 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 TAS2R9Q9NYW1 312 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 NLGN3Q9NZ94 848 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 PLEKHA6Q9Y2H5 1048 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF670-ZNF695F2Z2N8 137 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 ITGA10O75578 1167 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 RCBTB2O95199 551 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 CSTBP04080 98 aaKnown RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 CDH11P55287 796 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 OR4D1Q15615 310 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 C4orf46Q504U0 113 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 FIGNL1Q6PIW4 674 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 PNLDC1Q8NA58 520 aaKnown RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 NUP43Q8NFH3 380 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 OR8K5Q8NH50 307 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 MYLIPQ8WY64 445 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 SAMD11Q96NU1 681 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 OR1F2PQ96R84 312 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 IRF2BPLQ9H1B7 796 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 UCKL1Q9NWZ5 548 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 AKAP8O43823 692 aaKnown RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 RFPL1O75677 317 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 GATBO75879 557 aaKnown RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 OR2B3O76000 313 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 S1PR4O95977 384 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 SPARCP09486 303 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF16P17020 682 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 BPIP17213 487 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 CDKL1Q00532 357 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 SNTA1Q13424 505 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 ELAVL3Q14576 367 aaKnown RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 SOX17Q9H6I2 414 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 PEX16Q9Y5Y5 336 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 OTX2P32243 289 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 TMEM225Q6GV28 225 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 NCEH1Q6PIU2 408 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 FBXO46Q6PJ61 603 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF782Q6ZMW2 699 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 CSNK1A1LQ8N752 337 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 TCEANCQ8N8B7 351 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 DTX3Q8N9I9 347 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 DNAJA4Q8WW22 397 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 FAM3CQ92520 227 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 PIK3R3Q92569 461 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 C5AR2Q9P296 337 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 A0A1W2PPK0 400 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 ALDOAP04075 364 aaKnown RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 IL1RNP18510 177 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 TPRG1LQ5T0D9 272 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 ADGRD2Q7Z7M1 963 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 UMODL1-AS1Q8N2C9 162 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 OR6N2Q8NGY6 317 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 CMKLR1Q99788 373 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 POLDIP3Q9BY77 421 aaKnown RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 EHD1Q9H4M9 534 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 PTGES2Q9H7Z7 377 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 FARSAQ9Y285 508 aaKnown RBP12.41□□□□□ -0.42
PTPRK-207ENST00000368226 DOT1LQ8TEK3 1739 aa12.41□□□□□ -0.42
PTPRK-207ENST00000368226 ACOX3O15254 700 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 DUX1O43812 170 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 NTSR1P30989 418 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 PRKCDQ05655 676 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 RING1Q06587 406 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 MFSD2AQ8NA29 543 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 HAVCR1Q96D42 359 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 ANKRA2Q9H9E1 313 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 ZBTB20Q9HC78 741 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-207ENST00000368226 LAMP5Q9UJQ1 280 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-207ENST00000368226 DFNA5O60443 496 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 PIK3CBP42338 1070 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 SRYQ05066 204 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 PON3Q15166 354 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 LRIT3Q3SXY7 679 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 C6orf136Q5SQH8 315 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 SDR16C5Q8N3Y7 309 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 KCTD7Q96MP8 289 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 KCNK12Q9HB15 430 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 PDE7BQ9NP56 450 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 STARD5Q9NSY2 213 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 PCDHGB5Q9Y5G0 923 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 TCHHQ07283 1943 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 MYH13Q9UKX3 1938 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 DCDC1P59894 354 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 PLCXD2Q0VAA5 305 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 AVL9Q8NBF6 648 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 CRELD1Q96HD1 420 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 SOX30O94993 753 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 THEGLP0DJG4 465 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 ADRB3P13945 408 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 GSTM3P21266 225 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 LEPRP48357 1165 aaKnown RBP12.4□□□□□ -0.42
PTPRK-207ENST00000368226 SOX2P48431 317 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 OR4D2P58180 307 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 OR2L8Q8NGY9 312 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 ZDHHC1Q8WTX9 485 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF639Q9UID6 485 aa12.4□□□□□ -0.42
PTPRK-207ENST00000368226 SEC14L5O43304 696 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms