RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 DPH2Q9BQC3 489 aaPredicted RBP13.39□□□□□ -0.27
USF1-202ENST00000368020 MENTQ9BUN1 341 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 SPNS1Q9H2V7 528 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 ZSCAN32Q9NX65 697 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 THUMPD1Q9NXG2 353 aaKnown RBP13.39□□□□□ -0.27
USF1-202ENST00000368020 ENOPH1Q9UHY7 261 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 SLC17A4Q9Y2C5 497 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 ZNF451Q9Y4E5 1061 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 PCDHGA8Q9Y5G5 932 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 U3KQV3 271 aa13.39□□□□□ -0.27
USF1-202ENST00000368020 A8MVJ9 347 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 CACNB4O00305 520 aaPredicted RBP13.38□□□□□ -0.27
USF1-202ENST00000368020 CLEC3AO75596 197 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 ELK4P28324 431 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 TPP2P29144 1249 aaPredicted RBP13.38□□□□□ -0.27
USF1-202ENST00000368020 NTSR1P30989 418 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 GRK3P35626 688 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 MAGEA8P43361 318 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 MVDP53602 400 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 ISL1P61371 349 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 CSNK2BP67870 215 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 KCNJ10P78508 379 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 ABATP80404 500 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 MRPS21P82921 87 aaKnown RBP13.38□□□□□ -0.27
USF1-202ENST00000368020 CCINQ13939 588 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 RAB39AQ14964 217 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 TMEM35AQ53FP2 167 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 IFI44LQ53G44 452 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 CRB2Q5IJ48 1285 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 IER5LQ5T953 404 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 HS3ST5Q8IZT8 346 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 ZNF740Q8NDX6 193 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 OR2L8Q8NGY9 312 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 GANCQ8TET4 914 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 C12orf66Q96MD2 445 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 FERD3LQ96RJ6 166 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 GABRG3Q99928 467 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 RUBCNLQ9H714 662 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 THSD1Q9NS62 852 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 FBXL12Q9NXK8 326 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 PLAGL1Q9UM63 463 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 MRPS17Q9Y2R5 130 aaKnown RBP13.38□□□□□ -0.27
USF1-202ENST00000368020 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.38□□□□□ -0.27
USF1-202ENST00000368020 SNX5Q9Y5X3 404 aa13.38□□□□□ -0.27
USF1-202ENST00000368020 hCG_2039718K7EN88 272 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 M0QX08 132 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 SAP18O00422 153 aaKnown RBP13.37□□□□□ -0.27
USF1-202ENST00000368020 PLPP1O14494 284 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 PDPK1O15530 556 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 HOXC4P09017 264 aaPredicted RBP13.37□□□□□ -0.27
USF1-202ENST00000368020 PIGAP37287 484 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 TMBIM6P55061 237 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 PRDX1Q06830 199 aaKnown RBP13.37□□□□□ -0.27
USF1-202ENST00000368020 KRT33BQ14525 404 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 FAHD1Q6P587 224 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 CHST15Q7LFX5 561 aaPredicted RBP13.37□□□□□ -0.27
USF1-202ENST00000368020 VTCN1Q7Z7D3 282 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 TSPYL5Q86VY4 417 aaPredicted RBP13.37□□□□□ -0.27
USF1-202ENST00000368020 GEMIN6Q8WXD5 167 aaKnown RBP13.37□□□□□ -0.27
USF1-202ENST00000368020 TMIGD2Q96BF3 282 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 ZBED6CLQ96FA7 236 aaPredicted RBP13.37□□□□□ -0.27
USF1-202ENST00000368020 C7orf34Q96L11 122 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 NELL2Q99435 816 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 ACAT2Q9BWD1 397 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 SLC17A9Q9BYT1 436 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 SLC6A16Q9GZN6 736 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 CCNB1IP1Q9NPC3 277 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 MBNL1Q9NR56 388 aaKnown RBP13.37□□□□□ -0.27
USF1-202ENST00000368020 C1GALT1Q9NS00 363 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 KRT84Q9NSB2 600 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 PDP1Q9P0J1 537 aaPredicted RBP13.37□□□□□ -0.27
USF1-202ENST00000368020 RAPGEFL1Q9UHV5 662 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 ZFR2Q9UPR6 939 aaKnown RBP13.37□□□□□ -0.27
USF1-202ENST00000368020 TPRKBQ9Y3C4 175 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 OR1A2Q9Y585 309 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 PCYT1BQ9Y5K3 369 aaPredicted RBP13.37□□□□□ -0.27
USF1-202ENST00000368020 HEATR5BQ9P2D3 2071 aa13.37□□□□□ -0.27
USF1-202ENST00000368020 A0A1W2PPV9 198 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 TRBC2A0A5B9 178 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 NDUFS4O43181 175 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 GUCY1B2O75343 617 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 PDE9AO76083 593 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 EGFP01133 1207 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 GBAP04062 536 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 ARAFP10398 606 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 ACP5P13686 325 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 DRD2P14416 443 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 EFNA1P20827 205 aaPredicted RBP13.36□□□□□ -0.27
USF1-202ENST00000368020 PRKACGP22612 351 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 PKLRP30613 574 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 SOAT1P35610 550 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 BSGP35613 385 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 STARD6P59095 220 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 CDK6Q00534 326 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 CD47Q08722 323 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 PMS2P3Q13401 168 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 MLC1Q15049 377 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 ARMC8Q8IUR7 673 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 GJD3Q8N144 294 aa13.36□□□□□ -0.27
USF1-202ENST00000368020 ATG16L2Q8NAA4 619 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms