RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 TLR1Q15399 786 aa22.47■■□□□ 1.19
PFDN2-201ENST00000368010 B3GNTL1Q67FW5 361 aaPredicted RBP22.47■■□□□ 1.19
PFDN2-201ENST00000368010 CHSY3Q70JA7 882 aa22.47■■□□□ 1.19
PFDN2-201ENST00000368010 CUZD1Q86UP6 607 aa22.47■■□□□ 1.19
PFDN2-201ENST00000368010 AMER2Q8N7J2 671 aa22.47■■□□□ 1.19
PFDN2-201ENST00000368010 M1APQ8TC57 530 aa22.47■■□□□ 1.19
PFDN2-201ENST00000368010 REPS1Q96D71 796 aa22.47■■□□□ 1.19
PFDN2-201ENST00000368010 CMTM7Q96FZ5 175 aa22.47■■□□□ 1.19
PFDN2-201ENST00000368010 TBCDQ9BTW9 1192 aa22.47■■□□□ 1.19
PFDN2-201ENST00000368010 TEKT2Q9UIF3 430 aa22.47■■□□□ 1.19
PFDN2-201ENST00000368010 VPS4AQ9UN37 437 aa22.47■■□□□ 1.19
PFDN2-201ENST00000368010 MRPS33Q9Y291 106 aaKnown RBP22.47■■□□□ 1.19
PFDN2-201ENST00000368010 PCDHGA11Q9Y5H2 935 aa22.47■■□□□ 1.19
PFDN2-201ENST00000368010 IGKV3D-11A0A0A0MRZ8 115 aa22.46■■□□□ 1.19
PFDN2-201ENST00000368010 TGFB1P01137 390 aa22.46■■□□□ 1.19
PFDN2-201ENST00000368010 RCN2Q14257 317 aa22.46■■□□□ 1.19
PFDN2-201ENST00000368010 ABHD17BQ5VST6 288 aa22.46■■□□□ 1.19
PFDN2-201ENST00000368010 CYP4X1Q8N118 509 aa22.46■■□□□ 1.19
PFDN2-201ENST00000368010 HUS1BQ8NHY5 278 aa22.46■■□□□ 1.19
PFDN2-201ENST00000368010 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.46■■□□□ 1.19
PFDN2-201ENST00000368010 MAGEB10Q96LZ2 347 aaPredicted RBP22.46■■□□□ 1.19
PFDN2-201ENST00000368010 KCNK13Q9HB14 408 aa22.46■■□□□ 1.19
PFDN2-201ENST00000368010 MMP25Q9NPA2 562 aa22.46■■□□□ 1.19
PFDN2-201ENST00000368010 PRDM7Q9NQW5 492 aa22.46■■□□□ 1.19
PFDN2-201ENST00000368010 DAPP1Q9UN19 280 aa22.46■■□□□ 1.19
PFDN2-201ENST00000368010 TSC22D4Q9Y3Q8 395 aa22.46■■□□□ 1.19
PFDN2-201ENST00000368010 PCDHGA10Q9Y5H3 936 aa22.46■■□□□ 1.19
PFDN2-201ENST00000368010 TCRBV16S1A1N1A0A5B0 115 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 A8MUI8 341 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 H0YIV9 168 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 CLDN4O14493 209 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 ZIC2O95409 532 aaPredicted RBP22.45■■□□□ 1.18
PFDN2-201ENST00000368010 ARL1P40616 181 aaPredicted RBP22.45■■□□□ 1.18
PFDN2-201ENST00000368010 PIK3CBP42338 1070 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 LIM2P55344 173 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 SLC26A5P58743 744 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 PHEXP78562 749 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 ZNF169Q14929 603 aaPredicted RBP22.45■■□□□ 1.18
PFDN2-201ENST00000368010 KHDRBS2Q5VWX1 349 aaKnown RBP22.45■■□□□ 1.18
PFDN2-201ENST00000368010 LCA5Q86VQ0 697 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 FAM47BQ8NA70 645 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 GALNT11Q8NCW6 608 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 UBLCP1Q8WVY7 318 aaPredicted RBP22.45■■□□□ 1.18
PFDN2-201ENST00000368010 ATP6V1E2Q96A05 226 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 CENPKQ9BS16 269 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 NOL11Q9H8H0 719 aaKnown RBP22.45■■□□□ 1.18
PFDN2-201ENST00000368010 DMRT3Q9NQL9 472 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 NECTIN3Q9NQS3 549 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 PRTFDC1Q9NRG1 225 aa22.45■■□□□ 1.18
PFDN2-201ENST00000368010 SH3BGRLO75368 114 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 CLDN9O95484 217 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 HSD17B7P56937 341 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 ZNF33BQ06732 778 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 CPSF6Q16630 551 aaKnown RBP eCLIP22.44■■□□□ 1.18
PFDN2-201ENST00000368010 AP5B1Q2VPB7 878 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 DEPDC1Q5TB30 811 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 UBE3DQ7Z6J8 389 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 ZNF595Q8IYB9 648 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 CISD2Q8N5K1 135 aaKnown RBP22.44■■□□□ 1.18
PFDN2-201ENST00000368010 L3MBTL4Q8NA19 623 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 ACMSDQ8TDX5 336 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 SNRNP40Q96DI7 357 aaKnown RBP22.44■■□□□ 1.18
PFDN2-201ENST00000368010 SLC29A3Q9BZD2 475 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 OR51B5Q9H339 312 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 PLA2G3Q9NZ20 509 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 TBK1Q9UHD2 729 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 PCTPQ9UKL6 214 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 RNF11Q9Y3C5 154 aa22.44■■□□□ 1.18
PFDN2-201ENST00000368010 SAP18O00422 153 aaKnown RBP22.43■■□□□ 1.18
PFDN2-201ENST00000368010 RTCAO00442 366 aaKnown RBP22.43■■□□□ 1.18
PFDN2-201ENST00000368010 OR7A17O14581 309 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 HIST1H1TP22492 207 aaPredicted RBP22.43■■□□□ 1.18
PFDN2-201ENST00000368010 ATP5A1P25705 553 aaKnown RBP22.43■■□□□ 1.18
PFDN2-201ENST00000368010 SSR2P43308 183 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 TSFMP43897 325 aaKnown RBP22.43■■□□□ 1.18
PFDN2-201ENST00000368010 CCNG1P51959 295 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 RAP1GDS1P52306 607 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 SLC13A2Q13183 592 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 ZNF793Q6ZN11 406 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 SCUBE1Q8IWY4 988 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 RNF175Q8N4F7 328 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 ACOT4Q8N9L9 421 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 CATSPER1Q8NEC5 780 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 OR52B6Q8NGF0 335 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 HAS2Q92819 552 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 ZNF354BQ96LW1 612 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 CSF3RQ99062 836 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 MTERF1Q99551 399 aaKnown RBP22.43■■□□□ 1.18
PFDN2-201ENST00000368010 RNF32Q9H0A6 362 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 LYRM4Q9HD34 91 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 TMEM216Q9P0N5 145 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 COPG1Q9Y678 874 aaKnown RBP22.43■■□□□ 1.18
PFDN2-201ENST00000368010 SPACA6W5XKT8 324 aa22.43■■□□□ 1.18
PFDN2-201ENST00000368010 TENM4Q6N022 2769 aa22.42■■□□□ 1.18
PFDN2-201ENST00000368010 SAGE2PA6NJ88 616 aa22.42■■□□□ 1.18
PFDN2-201ENST00000368010 A8MT66 165 aa22.42■■□□□ 1.18
PFDN2-201ENST00000368010 SCELO95171 688 aa22.42■■□□□ 1.18
PFDN2-201ENST00000368010 RPS17P08708 135 aaKnown RBP22.42■■□□□ 1.18
PFDN2-201ENST00000368010 SBK3P0C264 359 aa22.42■■□□□ 1.18
PFDN2-201ENST00000368010 TAC1P20366 129 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms