RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 AQP11Q8NBQ7 271 aa10.71□□□□□ -0.69
CDC42BPA-205ENST00000366769 SLC22A17Q8WUG5 538 aa10.71□□□□□ -0.69
CDC42BPA-205ENST00000366769 CEP170BQ9Y4F5 1589 aaPredicted RBP10.71□□□□□ -0.69
CDC42BPA-205ENST00000366769 CD247P20963 164 aa10.71□□□□□ -0.69
CDC42BPA-205ENST00000366769 SLC1A2P43004 574 aa10.71□□□□□ -0.69
CDC42BPA-205ENST00000366769 ODF4Q2M2E3 257 aa10.71□□□□□ -0.69
CDC42BPA-205ENST00000366769 BCL7AQ4VC05 210 aa10.71□□□□□ -0.69
CDC42BPA-205ENST00000366769 IFI44LQ53G44 452 aa10.71□□□□□ -0.69
CDC42BPA-205ENST00000366769 NCEH1Q6PIU2 408 aa10.71□□□□□ -0.69
CDC42BPA-205ENST00000366769 SLC51AQ86UW1 340 aa10.71□□□□□ -0.69
CDC42BPA-205ENST00000366769 GDPD1Q8N9F7 314 aa10.71□□□□□ -0.69
CDC42BPA-205ENST00000366769 ARNT2Q9HBZ2 717 aa10.71□□□□□ -0.69
CDC42BPA-205ENST00000366769 PPIBP23284 216 aaKnown RBP10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 MRPL22Q9NWU5 206 aaKnown RBP10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 DAPL1A0PJW8 107 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 VSTM5A8MXK1 200 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 MC4RP32245 332 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 ECM1Q16610 540 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 CLEC9AQ6UXN8 241 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 TIPARPQ7Z3E1 657 aaKnown RBP10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 STUB1Q9UNE7 303 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 FER1L4A9Z1Z3 1794 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 TMX2-CTNND1H3BSU7 103 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 OXTRP30559 389 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 MAT2AP31153 395 aaKnown RBP10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 SCNN1AP37088 669 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 EEFSECP57772 596 aaKnown RBP10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 CYP1B1Q16678 543 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 NKAPLQ5M9Q1 402 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 ZDHHC17Q8IUH5 632 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 TMEM192Q8IY95 271 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 FOLH1BQ9HBA9 442 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 ABCC13Q9NSE7 274 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 ATXN7L1Q9ULK2 861 aaPredicted RBP10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 LYRM1O43325 122 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 OR1F1O43749 312 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 RENP00797 406 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 TARDBPQ13148 414 aaKnown RBP eCLIP10.71□□□□□ -0.72e-9■■■■□ 20.3
CDC42BPA-205ENST00000366769 HNRNPDQ14103 355 aaKnown RBP10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 RFTN2Q52LD8 501 aaPredicted RBP10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 C3P1Q6ZMU1 363 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 BEST3Q8N1M1 668 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 ACOT11Q8WXI4 607 aaPredicted RBP10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 ZDHHC12Q96GR4 267 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 SNRNP25Q9BV90 132 aaKnown RBP10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 DNAJC5BQ9UF47 199 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 ASB4Q9Y574 426 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 COLEC10Q9Y6Z7 277 aa10.71□□□□□ -0.7
CDC42BPA-205ENST00000366769 DISP1Q96F81 1524 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 STBD1O95210 358 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 DRD5P21918 477 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 PRR5P85299 388 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 PCLAFQ15004 111 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 METTL11BQ5VVY1 283 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 RBM18Q96H35 190 aaKnown RBP10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 BTBD2Q9BX70 525 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 EXTL2Q9UBQ6 330 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 ENTPD3O75355 529 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC34A2O95436 690 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 KIR3DL1P43629 444 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 MS4A2Q01362 244 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 FBXL16Q8N461 479 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 OR6C2Q9NZP2 312 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 KLF11O14901 512 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 CABYRO75952 493 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 OPN1SWP03999 348 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 AVPR1BP47901 424 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 C10orf62Q5T681 223 aaPredicted RBP10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 C9orf131Q5VYM1 1079 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 OTOP2Q7RTS6 562 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 ZNF550Q7Z398 422 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 KCTD20Q7Z5Y7 419 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 CTPS2Q9NRF8 586 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 NDRG2Q9UN36 371 aaKnown RBP10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 TLR5O60602 858 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 RFX5P48382 616 aaPredicted RBP10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 NDUFA6P56556 154 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 HERV-K104P61576 105 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 EIF5AP63241 154 aaKnown RBP10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 ZDHHC20Q5W0Z9 365 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 ATG9BQ674R7 924 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 KLK6Q92876 244 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC38A4Q969I6 547 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 ZNF558Q96NG5 402 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 CCDC32Q9BV29 185 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 PPP1R14DQ9NXH3 145 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 PRELID3BQ9Y3B1 194 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 EPCAMP16422 314 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 ALDH3B2P48448 385 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 CCL23P55773 120 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 CEACAM7Q14002 265 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 CCDC74AQ96AQ1 378 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 MOCOSQ96EN8 888 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 C16orf58Q96GQ5 468 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 PINK1Q9BXM7 581 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 DPEP2Q9H4A9 486 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 THUMPD1Q9NXG2 353 aaKnown RBP10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 SRRDQ9UH36 339 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 PREX1Q8TCU6 1659 aa10.7□□□□□ -0.7
CDC42BPA-205ENST00000366769 AHSA1O95433 338 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms