RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SLC14A2Q15849 920 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 UPP1Q16831 310 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 VMACQ2NL98 169 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 RAB41Q5JT25 222 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 ATG9BQ674R7 924 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 CNIH2Q6PI25 160 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 GLB1LQ6UWU2 654 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 LIPIQ6XZB0 460 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 PDZD3Q86UT5 571 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 RNF130Q86XS8 419 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 HYLS1Q96M11 299 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 RETREG1Q9H6L5 497 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 TBC1D17Q9HA65 648 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 REV1Q9UBZ9 1251 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 NCKAP1Q9Y2A7 1128 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 PCDHGB3Q9Y5G1 929 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 TNPO3Q9Y5L0 923 aaKnown RBP12.2□□□□□ -0.46
VAMP1-201ENST00000361716 WDR81Q562E7 1941 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 GNG14A0A1W2PPG7 69 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 MYADML2A6NDP7 307 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 ATXN8OSP0DMR3 200 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 SOAT1P35610 550 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 KIR3DL1P43629 444 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 CPT1AP50416 773 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 POM121L1PQ3SYA9 428 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 CLVS2Q5SYC1 327 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 LAMTOR1Q6IAA8 161 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 ZNF367Q7RTV3 350 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 BBS7Q8IWZ6 715 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 PGAP3Q96FM1 320 aaPredicted RBP12.2□□□□□ -0.46
VAMP1-201ENST00000361716 FAM126AQ9BYI3 521 aaPredicted RBP12.2□□□□□ -0.46
VAMP1-201ENST00000361716 RBCK1Q9BYM8 510 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 SPRTNQ9H040 489 aaPredicted RBP12.2□□□□□ -0.46
VAMP1-201ENST00000361716 TMEM245Q9H330 911 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 ZNF226Q9NYT6 803 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 OR7A17O14581 309 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 F2P00734 622 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 NAGAP17050 411 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 VSX2P58304 361 aaPredicted RBP12.2□□□□□ -0.46
VAMP1-201ENST00000361716 BRAT1Q6PJG6 821 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 SERPINA9Q86WD7 417 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 CELF5Q8N6W0 485 aaKnown RBP12.2□□□□□ -0.46
VAMP1-201ENST00000361716 UPRTQ96BW1 309 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 CRELD1Q96HD1 420 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 DCLRE1CQ96SD1 692 aaKnown RBP12.2□□□□□ -0.46
VAMP1-201ENST00000361716 CPPED1Q9BRF8 314 aaPredicted RBP12.2□□□□□ -0.46
VAMP1-201ENST00000361716 NXF2Q9GZY0 626 aaKnown RBP12.2□□□□□ -0.46
VAMP1-201ENST00000361716 ASAH2Q9NR71 780 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 SSNA1O43805 119 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 TPST2O60704 377 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 ENTPD6O75354 484 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 IFNA16P05015 189 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 IGFBP1P08833 259 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-201ENST00000361716 TACR2P21452 398 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 CPN2P22792 545 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 MAP2K6P52564 334 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 ARHGDIBP52566 201 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 CTBP2P56545 445 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 MAD2L1Q13257 205 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-201ENST00000361716 XKRXQ6PP77 449 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 FAM92BQ6ZTR7 304 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 FBLIM1Q8WUP2 373 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 ASZ1Q8WWH4 475 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 PIGKQ92643 395 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 PAK6Q9NQU5 681 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-201ENST00000361716 CD84Q9UIB8 345 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 KLK4Q9Y5K2 254 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 CHURC1-FNTBB4DL54 471 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 LGALS8O00214 317 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 INSIG1O15503 277 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 PRAMEF12O95522 483 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 HIST1H2AGP0C0S8 130 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-201ENST00000361716 MSL3P1P0C860 447 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 HIST1H2ADP20671 130 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 ASAH1Q13510 395 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 SERINC3Q13530 473 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 FRMPD2BQ6IN97 320 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 SHFQ7M4L6 423 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 SMG7Q92540 1137 aaKnown RBP12.19□□□□□ -0.46
VAMP1-201ENST00000361716 ZBED6CLQ96FA7 236 aaPredicted RBP12.19□□□□□ -0.46
VAMP1-201ENST00000361716 HIST1H2AHQ96KK5 128 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 HIST1H2AJQ99878 128 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 H2AFJQ9BTM1 129 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 ADGRE3Q9BY15 652 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 LINC00597Q9H2U6 94 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 TLR8Q9NR97 1041 aaKnown RBP12.19□□□□□ -0.46
VAMP1-201ENST00000361716 ERVW-1Q9UQF0 538 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 VPS9D1Q9Y2B5 631 aa12.19□□□□□ -0.46
VAMP1-201ENST00000361716 CFAP20Q9Y6A4 193 aaKnown RBP12.19□□□□□ -0.46
VAMP1-201ENST00000361716 MROH6A6NGR9 719 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 STX16O14662 325 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 KDM4BO94953 1096 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 ADRA2AP08913 450 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 SRCP12931 536 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 EPHA5P54756 1037 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 IL10RBQ08334 325 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 PTGES3Q15185 160 aaKnown RBP12.18□□□□□ -0.46
VAMP1-201ENST00000361716 AANATQ16613 207 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 MTFR2Q6P444 385 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 FAM171BQ6P995 826 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms