RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 KCMF1Q9P0J7 381 aa2.71□□□□□ -1.97
LTN1-201ENST00000361371 ABCD2Q9UBJ2 740 aa2.71□□□□□ -1.97
LTN1-201ENST00000361371 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.71□□□□□ -1.97
LTN1-201ENST00000361371 CLDN16Q9Y5I7 305 aa2.71□□□□□ -1.97
LTN1-201ENST00000361371 SGK494L7N484 410 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 VILLO15195 856 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 FGF17O60258 216 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 LDB3O75112 727 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 SEMA7AO75326 666 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 RECKO95980 971 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 PTNP21246 168 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 OR1D4P47884 311 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 CTAG1AP78358 180 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 PLOD1Q02809 727 aaPredicted RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 CSTF3Q12996 717 aaKnown RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 SNCBQ16143 134 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 CYP51A1Q16850 503 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 HLA-BQ31612 363 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 LRIF1Q5T3J3 769 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 TMEM214Q6NUQ4 689 aaKnown RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 TMEM179BQ7Z7N9 219 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 ZAR1Q86SH2 424 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 C17orf82Q86X59 251 aaPredicted RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 GALNT4Q8N4A0 578 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 AFAP1L2Q8N4X5 818 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 ENDOVQ8N8Q3 282 aaKnown RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 OR2T12Q8NG77 320 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 ELF4Q99607 663 aaPredicted RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 QRSL1Q9H0R6 528 aaKnown RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 ALG2Q9H553 416 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 GAREM1Q9H706 876 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 MVB12BQ9H7P6 319 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 SPAG4Q9NPE6 437 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 ASIC5Q9NY37 505 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 OR6C2Q9NZP2 312 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 GMEB2Q9UKD1 530 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 MAU2Q9Y6X3 613 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 U3KQV3 271 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 SCAMP2O15127 329 aaKnown RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 KCNK5O95279 499 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 AIFM1O95831 613 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 FAM58BPP0C7Q3 252 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 ZNF888P0CJ79 500 aaPredicted RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 PRPS2P11908 318 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 HIST1H1TP22492 207 aaPredicted RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 MAPK12P53778 367 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 RHDQ02161 417 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 SFSWAPQ12872 951 aaKnown RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 IQCCQ4KMZ1 466 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.71□□□□□ -1.98
LTN1-201ENST00000361371 OGFOD3Q6PK18 319 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 SHISA6Q6ZSJ9 500 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 LAPTM4BQ86VI4 370 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 DHFR2Q86XF0 187 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 TMEM132CQ8N3T6 1108 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 HORMAD2Q8N7B1 307 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 C1QTNF7Q9BXJ2 289 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 MMADHCQ9H3L0 296 aaPredicted RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 LIN28AQ9H9Z2 209 aaKnown RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 CAPN10Q9HC96 672 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 STX18Q9P2W9 335 aaKnown RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 RIMS3Q9UJD0 308 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 MAP4K5Q9Y4K4 846 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 PCDHB11Q9Y5F2 797 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 IGHV1OR21-1A0A087WYE8 117 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 A0A1W2PRB8 838 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 CLIC1O00299 241 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 DLGAP1O14490 977 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 LAMTOR5O43504 91 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 FRS3O43559 492 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 ZIC2O95409 532 aaPredicted RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 TIAF1O95411 115 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 HOXC4P09017 264 aaPredicted RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 CT62P0C5K7 136 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 PRPS1L1P21108 318 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 CD1CP29017 333 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 SHMT2P34897 504 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 CCR8P51685 355 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 SLC34A1Q06495 639 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 GRIK2Q13002 908 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 SLAMF1Q13291 335 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 HIST2H2ACQ16777 129 aaPredicted RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 TRIM61Q5EBN2 209 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 CCNJQ5T5M9 372 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 NDUFAF5Q5TEU4 345 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 HIST2H2AA3Q6FI13 130 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 ANGPTL8Q6UXH0 198 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 EFL1Q7Z2Z2 1120 aaKnown RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 KANSL1Q7Z3B3 1105 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 NET1Q7Z628 596 aaPredicted RBP2.71□□□□□ -1.98
LTN1-201ENST00000361371 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.71□□□□□ -1.98
LTN1-201ENST00000361371 KRT78Q8N1N4 520 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 FAM47BQ8NA70 645 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 ZFP90Q8TF47 636 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 COL26A1Q96A83 441 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 COQ8BQ96D53 544 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 SHDQ96IW2 340 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 DACH2Q96NX9 599 aa2.71□□□□□ -1.98
LTN1-201ENST00000361371 QRFPRQ96P65 431 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms