RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 TRIM36Q9NQ86 728 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 USP3Q9Y6I4 520 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 SIPA1L3O60292 1781 aaPredicted RBP15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 FAM170BA6NMN3 283 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 ZNF879B4DU55 563 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 OR3A3P47888 321 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 CDKN1CP49918 316 aaPredicted RBP15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 FADDQ13158 208 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 CFAP206Q8IYR0 622 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 EFCAB11Q9BUY7 163 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 ELFN1P0C7U0 828 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 TAS2R50P59544 299 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 IQCHQ86VS3 1027 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 GPR150Q8NGU9 434 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 DYNC2LI1Q8TCX1 351 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 CCDC115Q96NT0 180 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 SLC6A15Q9H2J7 730 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 RHBGQ9H310 441 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 FKBP7Q9Y680 259 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 ZNF780BQ9Y6R6 833 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 A3GALT2U3KPV4 340 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 FXYD1O00168 92 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 ANKRD28O15084 1053 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 ETFAP13804 333 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 F8A1P23610 371 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 PSMA6P60900 246 aaKnown RBP15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 SLC35A2P78381 396 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 GALNT13Q8IUC8 556 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 PJA1Q8NG27 643 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 CD200R1Q8TD46 325 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 DNASE1L2Q92874 299 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 RAB8BQ92930 207 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 EPYCQ99645 322 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 IFT27Q9BW83 186 aa15.37■□□□□ 0.05
CLSTN1-201ENST00000361311 OR6A2O95222 327 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 ADORA3P0DMS8 318 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 RHCEP18577 417 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 RPS13P62277 151 aaKnown RBP15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 SNTA1Q13424 505 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 LARS2Q15031 903 aaKnown RBP15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 GDPD3Q7L5L3 318 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 VASH1Q7L8A9 365 aaPredicted RBP15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 DNAJC22Q8N4W6 341 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 COQ8BQ96D53 544 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 MRPL9Q9BYD2 267 aaKnown RBP15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 HOXD1Q9GZZ0 328 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 TUBB1Q9H4B7 451 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 P2RX2Q9UBL9 471 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 ATPIF1Q9UII2 106 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 IQCMA0A1B0GVH7 501 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 PCDH8O95206 1070 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 HOXA11P31270 313 aaPredicted RBP15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 MICAQ29983 383 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 UAP1L1Q3KQV9 507 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 LRRC73Q5JTD7 316 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 FRRS1Q6ZNA5 592 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 OAFQ86UD1 273 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 OR51B5Q9H339 312 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 HLA-DQA2P01906 255 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 LAMP1P11279 417 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 EDNRBP24530 442 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 PSMA3P25788 255 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 AVPR1BP47901 424 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 CCR4P51679 360 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 CDC20Q12834 499 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 CHPFQ8IZ52 775 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 OR2T35Q8NGX2 323 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 OR4C6Q8NH72 309 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 ADAMTSL3P82987 1691 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 DOCK2Q92608 1830 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 SERPINA3P01011 423 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 ZNF280AP59817 542 aaPredicted RBP15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 ZXDBP98169 803 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 ZNF763Q0D2J5 394 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 POU4F3Q15319 338 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 SLC25A25Q6KCM7 469 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 AGTRAPQ6RW13 159 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 FTMTQ8N4E7 242 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 YIPF4Q9BSR8 244 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 PLAC1Q9HBJ0 212 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 TNFRSF12AQ9NP84 129 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 GKN1Q9NS71 199 aa15.36■□□□□ 0.05
CLSTN1-201ENST00000361311 C2orf92A0A1B0GVN3 265 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 LRRN3E7EW58 273 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 FAAHO00519 579 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 SBK3P0C264 359 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 TLX1P31314 330 aaPredicted RBP15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 EVI2BP34910 448 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 RGMBQ6NW40 437 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 Q6ZSR9 355 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 SERPINA11Q86U17 422 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 MFSD6LQ8IWD5 586 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 LRRN3Q9H3W5 708 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 REEP4Q9H6H4 257 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 KLK4Q9Y5K2 254 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 LAMB1P07942 1786 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 PTHP01270 115 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 H2AFB2P0C5Z0 115 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 BMP1P13497 986 aa15.35■□□□□ 0.05
CLSTN1-201ENST00000361311 VEZF1Q14119 521 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms