RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 TRAPPC6BQ86SZ2 158 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 NXPE2Q96DL1 559 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 KCNK12Q9HB15 430 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 ATXN10Q9UBB4 475 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 RGPD5Q99666 1765 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 ARL3P36405 182 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 PSMD7P51665 324 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 OR51I1Q9H343 314 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 B4GALT7Q9UBV7 327 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 PDE10AQ9Y233 779 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 F10P00742 488 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 IRF5Q13568 498 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 MARCH9Q86YJ5 346 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 EID2Q8N6I1 236 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 OR8K5Q8NH50 307 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 HLA-CQ95604 372 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 TOE1Q96GM8 510 aaKnown RBP19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 CYTH4Q9UIA0 394 aa19.54■□□□□ 0.72
CDC42BPB-201ENST00000361246 C13orf42A0A1B0GVH6 325 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 A0A1B0GVI7 797 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 FABP12A6NFH5 140 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 TP53I11O14683 189 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 IL3P08700 152 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 DCTN2Q13561 401 aaKnown RBP19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 ZMYND11Q15326 602 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 OR5K1Q8NHB7 308 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 TCEAL4Q96EI5 215 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 MCOLN1Q9GZU1 580 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 EBF2Q9HAK2 575 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 GRHL1Q9NZI5 618 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 ZNF69Q9UC07 566 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 AGR2O95994 175 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 LYSMD4Q5XG99 296 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 SVOPLQ8N434 492 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 NINJ1Q92982 152 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 ZNF224Q9NZL3 707 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 DLX3O60479 287 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 GRK5P34947 590 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 ASB6Q9NWX5 421 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 ACAD8Q9UKU7 415 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 POFUT2Q9Y2G5 429 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 BACE2Q9Y5Z0 518 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 NFAT5O94916 1531 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 OTOL1A6NHN0 477 aaPredicted RBP19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 EI24O14681 340 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 AP1S2P56377 157 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 NR0B2Q15466 257 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 GXYLT1Q4G148 440 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 OR56A1Q8NGH5 318 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 TMEM41AQ96HV5 264 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 USB1Q9BQ65 265 aaKnown RBP19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 MACROD1Q9BQ69 325 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 GRIK2Q13002 908 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 LIX1LQ8IVB5 337 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 SLC30A8Q8IWU4 369 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 TSSK6Q9BXA6 273 aa19.53■□□□□ 0.72
CDC42BPB-201ENST00000361246 SLC33A1O00400 549 aaPredicted RBP19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 ITGA10O75578 1167 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 VNN2O95498 520 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 TMED4Q7Z7H5 227 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 ZNF641Q96N77 438 aaPredicted RBP19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 FN3KQ9H479 309 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 PAFAH1B3Q15102 231 aaKnown RBP19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 TIGD6Q17RP2 521 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 PLET1Q6UQ28 207 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 SRA1Q9HD15 236 aaKnown RBP19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 VEGFDO43915 354 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 LCA5LO95447 670 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 XRCC1P18887 633 aaPredicted RBP19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 GJA5P36382 358 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 ADH7P40394 386 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 ZNF234Q14588 700 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 PLXDC1Q8IUK5 500 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 PLEKHO2Q8TD55 490 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 OTUB2Q96DC9 234 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 NECTIN4Q96NY8 510 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 KCNJ11Q14654 390 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 TEPSINQ96N21 525 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 CITED4Q96RK1 184 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 SLC5A7Q9GZV3 580 aa19.52■□□□□ 0.72
CDC42BPB-201ENST00000361246 HTR3EA5X5Y0 456 aa19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 ADRB3P13945 408 aa19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 MAGEA11P43364 429 aa19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 RPL5P46777 297 aaKnown RBP19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 STC1P52823 247 aa19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 WDR5P61964 334 aaKnown RBP19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 P2RY8Q86VZ1 359 aa19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 FAM124BQ9H5Z6 455 aaPredicted RBP19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 C5AR2Q9P296 337 aa19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 MYEF2Q9P2K5 600 aaKnown RBP19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 ARFGEF2Q9Y6D5 1785 aa19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 GMPRP36959 345 aa19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 GALNT2Q10471 571 aa19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 KANSL1Q7Z3B3 1105 aa19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 LRRC3Q9BY71 257 aa19.52■□□□□ 0.71
CDC42BPB-201ENST00000361246 A8MVJ9 347 aa19.51■□□□□ 0.71
CDC42BPB-201ENST00000361246 GPIP06744 558 aa19.51■□□□□ 0.71
CDC42BPB-201ENST00000361246 CYBAP13498 195 aa19.51■□□□□ 0.71
CDC42BPB-201ENST00000361246 NAA10P41227 235 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms