RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 ITM2BQ9Y287 266 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 PADI2Q9Y2J8 665 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 EFCAB10A6NFE3 127 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 SGTAO43765 313 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 SH3BP5O60239 455 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 KRT75O95678 551 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 SOX6P35712 828 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 HNMTP50135 292 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 CDK6Q00534 326 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 ARMC4Q5T2S8 1044 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 GCNT6Q5T4J0 391 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 ASTLQ6HA08 431 aaPredicted RBP12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 TMC5Q6UXY8 1006 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 LINC00299Q6ZSB3 139 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 ATCAYQ86WG3 371 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 OR4C15Q8NGM1 316 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 FYTTD1Q96QD9 318 aaKnown RBP12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 ABCB9Q9NP78 766 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 ZNF221Q9UK13 617 aa12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 WBP11Q9Y2W2 641 aaKnown RBP12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 HELZP42694 1942 aaKnown RBP12.88□□□□□ -0.35
PPARGC1B-202ENST00000360453 FADS2P1A8MWK0 482 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 CCNB2O95067 398 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 CBSLP0DN79 551 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 TNNI3P19429 210 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 PTNP21246 168 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 PCGF2P35227 344 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 CBSP35520 551 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 OPRD1P41143 372 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 PRKCDQ05655 676 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 VEPH1Q14D04 833 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 AGAP6Q5VW22 663 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 COMMD6Q7Z4G1 85 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 FAM9CQ8IZT9 166 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 OR6F1Q8NGZ6 308 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 CYB5D2Q8WUJ1 264 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 AGAP4Q96P64 663 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 PLAGL1Q9UM63 463 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 CARD8Q9Y2G2 431 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 POFUT2Q9Y2G5 429 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 PEX16Q9Y5Y5 336 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 PLD2O14939 933 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 STATHP02808 62 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 IMPA1P29218 277 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 ALDH9A1P49189 494 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 LIM2P55344 173 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 DEFA1P59665 94 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 DEFA3P59666 94 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 SEC23BQ15437 767 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 DEF8Q6ZN54 512 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 NPAS4Q8IUM7 802 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 CLP1Q92989 425 aaKnown RBP12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 OPALINQ96PE5 141 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 OR2A14Q96R47 310 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 MCCC1Q96RQ3 725 aaPredicted RBP12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 HHATLQ9HCP6 504 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 CCL26Q9Y258 94 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 PRKAB1Q9Y478 270 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 SCN8AQ9UQD0 1980 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 MYO10Q9HD67 2058 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 PCM1Q15154 2024 aa12.87□□□□□ -0.35
PPARGC1B-202ENST00000360453 A0A0G2JN53 185 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 A0A1W2PQ45 241 aaPredicted RBP12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 A0A1W2PQY0 241 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 A0A1W2PRU2 124 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 AGAP14A8MT82 685 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 CCRL2O00421 344 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 FFAR1O14842 300 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 SNX4O95219 450 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 HTR3AP46098 478 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 ATN1P54259 1190 aaPredicted RBP12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 CDC42P60953 191 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 BRAT1Q6PJG6 821 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 SHFQ7M4L6 423 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 NLRP8Q86W28 1048 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 MMAAQ8IVH4 418 aaKnown RBP12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 ZFP41Q8N8Y5 198 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 COQ8BQ96D53 544 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 IL17FQ96PD4 163 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 SMURF1Q9HCE7 757 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 KLHL20Q9Y2M5 609 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 A0A1W2PQ09 198 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 WASHC1A8K0Z3 465 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 OR10H3O60404 316 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 SEMA7AO75326 666 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 TNFRSF21O75509 655 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 ANXA8P13928 327 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 PRPH2P23942 346 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 TIA1P31483 386 aaKnown RBP eCLIP12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 RFX2P48378 723 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 SNRPD1P62314 119 aaKnown RBP12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 CD83Q01151 205 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 MTA1Q13330 715 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 SLBPQ14493 270 aaKnown RBP eCLIP12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 PUM1Q14671 1186 aaKnown RBP eCLIP12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 C22orf39Q6P5X5 142 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 WASH2PQ6VEQ5 465 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 RNF165Q6ZSG1 346 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 GAREM2Q75VX8 874 aa12.86□□□□□ -0.35
PPARGC1B-202ENST00000360453 CCDC190Q86UF4 302 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms