RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ARHGAP11AQ6P4F7 1023 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 SHQ1Q6PI26 577 aaKnown RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 KCTD18Q6PI47 426 aaPredicted RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 TREM1Q9NP99 234 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 TSPAN6O43657 245 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 GKN3PP0CG01 181 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 CD9P21926 228 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 ZNF45Q02386 682 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 OR4E2Q8NGC2 313 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 YIPF1Q9Y548 306 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 ADGRB2O60241 1585 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 TRBC2A0A5B9 178 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 NPAS3Q8IXF0 933 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 MALT1Q9UDY8 824 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 LRRN3E7EW58 273 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 H0YAE9 185 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 PRSS55Q6UWB4 352 aaPredicted RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 LDB1Q86U70 411 aaPredicted RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 DCBLD1Q8N8Z6 715 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 OR9A4Q8NGU2 314 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 PPP1R35Q8TAP8 253 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 LRRN3Q9H3W5 708 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 SH2B3Q9UQQ2 575 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 SETD1AO15047 1707 aaKnown RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 MYBPHLA2RUH7 354 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 YJEFN3A6XGL0 299 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 SYPP08247 313 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 UBL4AP11441 157 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 CCNOP22674 350 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 GAS6Q14393 721 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 MLIPQ5VWP3 458 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 OR2T33Q8NG76 320 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 KIAA1191Q96A73 305 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 KDELR3O43731 214 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 ZNF217O75362 1048 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 BDKRB1P46663 353 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 ZBED5Q49AG3 693 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 RARRES3Q9UL19 164 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 WNK1Q9H4A3 2382 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 BLOC1S5-TXNDC5H3BN57 136 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 SAP18O00422 153 aaKnown RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 GRIK2Q13002 908 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 ARMC5Q96C12 935 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 HBEGFQ99075 208 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 FEM1AQ9BSK4 669 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 PHYHO14832 338 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 GSRP00390 522 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 RBMS1P29558 406 aaKnown RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 HGSNATQ68CP4 663 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 TMED4Q7Z7H5 227 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 C12orf42Q96LP6 360 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 TBX5Q99593 518 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 CGREF1Q99674 301 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 DNTTIP1Q9H147 329 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 RANBP3Q9H6Z4 567 aaPredicted RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 OXSMQ9NWU1 459 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 EXOSC1Q9Y3B2 195 aaKnown RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 A0A1W2PP18 115 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 FAM155BO75949 473 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 ALDOAP04075 364 aaKnown RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 MFSD13AQ14CX5 517 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 ATRNL1Q5VV63 1379 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 NCBP2-AS2Q69YL0 99 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 SMYD5Q6GMV2 418 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 Q6ZVU0 165 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 NRROSQ86YC3 692 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 LRRC42Q9Y546 428 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 NUP98P52948 1817 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 EI24O14681 340 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 PROM1O43490 865 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 ECI2O75521 394 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 S100PP25815 95 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 GSTM2P28161 218 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 ACADVLP49748 655 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 RPS24P62847 133 aaKnown RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 ISLR2Q6UXK2 745 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 CLIP4Q8N3C7 705 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 GCDHQ92947 438 aaPredicted RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 PTBP2Q9UKA9 531 aaKnown RBP9.35□□□□□ -0.91
CUX1-203ENST00000360264 CMAHPQ9Y471 501 aa9.35□□□□□ -0.91
CUX1-203ENST00000360264 UNC119BA6NIH7 251 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 HSBP1L1C9JCN9 74 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 J3QLW9 94 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 DNM1LO00429 736 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 ZNF19P17023 458 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 KCNJ11Q14654 390 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 ZNF805Q5CZA5 627 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 SMARCD2Q92925 531 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 MT-ND2P03891 347 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 AQP4P55087 323 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 ADAM17P78536 824 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 ZNF367Q7RTV3 350 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 OR8J3Q8NGG0 315 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 POF1BQ8WVV4 589 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 DLGAP1O14490 977 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 C22orf39Q6P5X5 142 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 NCEH1Q6PIU2 408 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 ABHD5Q8WTS1 349 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 HSH2DQ96JZ2 352 aa9.34□□□□□ -0.91
CUX1-203ENST00000360264 CASD1Q96PB1 797 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms