RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 BRCC3P46736 316 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 RIPPLY1Q0D2K3 151 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 SERINC3Q13530 473 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 PAN2Q504Q3 1202 aaKnown RBP14.32□□□□□ -0.12
UBAP1-202ENST00000359544 ALFQ53S48 1182 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 ZRANB3Q5FWF4 1079 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 PTCHD4Q6ZW05 846 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 TIFAQ96CG3 184 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 MND1Q9BWT6 205 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 FAM126AQ9BYI3 521 aaPredicted RBP14.32□□□□□ -0.12
UBAP1-202ENST00000359544 ACPTQ9BZG2 426 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 ANKRA2Q9H9E1 313 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 ELOVL2Q9NXB9 296 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 HCSTQ9UBK5 93 aa14.32□□□□□ -0.12
UBAP1-202ENST00000359544 LSM2Q9Y333 95 aaKnown RBP14.32□□□□□ -0.12
UBAP1-202ENST00000359544 GPR182O15218 404 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 GJB5O95377 273 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 B3GALT4O96024 378 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 SLC2A2P11168 524 aaPredicted RBP14.31□□□□□ -0.12
UBAP1-202ENST00000359544 ODC1P11926 461 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 CTPS1P17812 591 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 LPOP22079 712 aaPredicted RBP14.31□□□□□ -0.12
UBAP1-202ENST00000359544 SPIBQ01892 262 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 HNRNPA0Q13151 305 aaKnown RBP14.31□□□□□ -0.12
UBAP1-202ENST00000359544 SPHARQ15513 63 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 HKDC1Q2TB90 917 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 ZNF648Q5T619 568 aaPredicted RBP14.31□□□□□ -0.12
UBAP1-202ENST00000359544 MEDAGQ5VYS4 303 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 ZNF621Q6ZSS3 439 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 CDH24Q86UP0 819 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 OR4C15Q8NGM1 316 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 SPPL2AQ8TCT8 520 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 UBTD2Q8WUN7 234 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 NIPSNAP1Q9BPW8 284 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 DPH2Q9BQC3 489 aaPredicted RBP14.31□□□□□ -0.12
UBAP1-202ENST00000359544 SYNDIG1Q9H7V2 258 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 MYO9BQ13459 2157 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 MEIS3P2A8K0S8 358 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 ADRA2AP08913 450 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 ARSBP15848 533 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 EPB42P16452 691 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 CTAG1AP78358 180 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 SMAD3P84022 425 aaKnown RBP14.31□□□□□ -0.12
UBAP1-202ENST00000359544 MTAPQ13126 283 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 DSC3Q14574 896 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 MFSD13AQ14CX5 517 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 KLHL17Q6TDP4 642 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 TEX261Q6UWH6 196 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 GPR155Q7Z3F1 870 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 OR8H3Q8N146 312 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 QRFPRQ96P65 431 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 HHIPQ96QV1 700 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 MARVELD1Q9BSK0 173 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 SPNS1Q9H2V7 528 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 TMEM184CQ9NVA4 438 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 RLIMQ9NVW2 624 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 TSR3Q9UJK0 312 aaKnown RBP14.31□□□□□ -0.12
UBAP1-202ENST00000359544 NDRG2Q9UN36 371 aaKnown RBP14.31□□□□□ -0.12
UBAP1-202ENST00000359544 ING4Q9UNL4 249 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 PCDHGB7Q9Y5F8 929 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 U3KQ87 197 aa14.31□□□□□ -0.12
UBAP1-202ENST00000359544 LOC730098B7Z3J9 87 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 SMLR1H3BR10 107 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 M0R129 80 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 CSO75390 466 aaKnown RBP14.3□□□□□ -0.12
UBAP1-202ENST00000359544 SERPINI2O75830 405 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 SDC1P18827 310 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 RGS4P49798 205 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 MXD1Q05195 221 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 C1DQ13901 141 aaKnown RBP14.3□□□□□ -0.12
UBAP1-202ENST00000359544 GRIN2CQ14957 1233 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 PTCHD3Q3KNS1 767 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 ALG1LQ6GMV1 187 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 MDGA1Q8NFP4 955 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 LPPQ93052 612 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 EXOC2Q96KP1 924 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 TLR8Q9NR97 1041 aaKnown RBP14.3□□□□□ -0.12
UBAP1-202ENST00000359544 NDUFAF4Q9P032 175 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 TNFRSF10DQ9UBN6 386 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 FKBPLQ9UIM3 349 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 CORO2BQ9UQ03 480 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 PCDHB1Q9Y5F3 818 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 SCAMP3O14828 347 aaKnown RBP14.3□□□□□ -0.12
UBAP1-202ENST00000359544 LYRM1O43325 122 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 TLR5O60602 858 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 PRAMEF11O60813 436 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 SDC2P34741 201 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 TGM4P49221 684 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 SRSF11Q05519 484 aaKnown RBP14.3□□□□□ -0.12
UBAP1-202ENST00000359544 MLLT11Q13015 90 aaPredicted RBP14.3□□□□□ -0.12
UBAP1-202ENST00000359544 PTGES3Q15185 160 aaKnown RBP14.3□□□□□ -0.12
UBAP1-202ENST00000359544 MS4A13Q5J8X5 152 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 ANKRD54Q6NXT1 300 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 SLC37A3Q8NCC5 494 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 ATP6V1C2Q8NEY4 427 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 KLHL6Q8WZ60 621 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 MTFMTQ96DP5 389 aaKnown RBP14.3□□□□□ -0.12
UBAP1-202ENST00000359544 CMTM7Q96FZ5 175 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 ACBD6Q9BR61 282 aa14.3□□□□□ -0.12
UBAP1-202ENST00000359544 SLC28A3Q9HAS3 691 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms