RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TLCD2A6NGC4 264 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 URADA6NGE7 173 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 A8MUI8 341 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 RTCAO00442 366 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 DUX1O43812 170 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 CTSVO60911 334 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 STATHP02808 62 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 GBAP04062 536 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 ST6GAL1P15907 406 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 ME2P23368 584 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 GPR3P46089 330 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 SLC7A2P52569 658 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 HNRNPFP52597 415 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 TAS2R50P59544 299 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 TRA2BP62995 288 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 KLC1Q07866 573 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 C2orf80Q0P641 193 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 LRRC74AQ0VAA2 488 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 HYAL2Q12891 473 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 CAPRIN1Q14444 709 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 NR1D2Q14995 579 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 NR0B2Q15466 257 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 SPATS1Q496A3 300 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 ZC3H12BQ5HYM0 836 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 CPTPQ5TA50 214 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 ANXA8L1Q5VT79 327 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 C1orf146Q5VVC0 180 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 OR4F3Q6IEY1 312 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 FAM71E1Q6IPT2 247 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 TCEAL6Q6IPX3 200 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 FBXO42Q6P3S6 717 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 RIPOR1Q6ZS17 1223 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 UBE3DQ7Z6J8 389 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 C10orf67Q8IYJ2 551 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 FAM181AQ8N9Y4 354 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 OR7A2PQ8NGA2 310 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 OR8J2Q8NGG1 315 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 NUDT8Q8WV74 236 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 GTF2H4Q92759 462 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 TCEAL3Q969E4 200 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 PPCDCQ96CD2 204 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 CCDC124Q96CT7 223 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 AHCYL2Q96HN2 611 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 PPM1MQ96MI6 270 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 OR2A5Q96R48 311 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 C17orf62Q9BQA9 187 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 TBCDQ9BTW9 1192 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 DUSP26Q9BV47 211 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 NLNQ9BYT8 704 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 ZMYND15Q9H091 742 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 COPS7BQ9H9Q2 264 aaPredicted RBP13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 LHX9Q9NQ69 397 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 PLSCR2Q9NRY7 297 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 EPHA6Q9UF33 1036 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 MAN2B2Q9Y2E5 1009 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 PCDHGB2Q9Y5G2 931 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 SCN3AQ9NY46 2000 aa13.17□□□□□ -0.3
PDLIM5-203ENST00000359265 ARID1BQ8NFD5 2236 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 A0A096LPI6 279 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 A0A0A6YYD5 115 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 HYAL3O43820 417 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 MGRN1O60291 552 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 GUCY1B2O75343 617 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 ERN1O75460 977 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 IL3P08700 152 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 FURINP09958 794 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 SLC6A2P23975 617 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 ALDH4A1P30038 563 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 PLA2G16P53816 162 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 GPLD1P80108 840 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 RIPK1Q13546 671 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 PDE7AQ13946 482 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 ABHD17CQ6PCB6 329 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 PROSER1Q86XN7 944 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 HPS6Q86YV9 775 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 ZCCHC7Q8N3Z6 543 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 EFCAB3Q8N7B9 438 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 VPS37AQ8NEZ2 397 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 COQ8BQ96D53 544 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 TM4SF19Q96DZ7 209 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 ZDHHC12Q96GR4 267 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 FCRL4Q96PJ5 515 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 TRAPPC9Q96Q05 1148 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 CGREF1Q99674 301 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 CCDC3Q9BQI4 270 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 SLC39A3Q9BRY0 314 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 BHLHE41Q9C0J9 482 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 ROGDIQ9GZN7 287 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 AICDAQ9GZX7 198 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 KLHL31Q9H511 634 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 DENND2DQ9H6A0 471 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 SYNPO2LQ9H987 977 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 MIEF1Q9NQG6 463 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 DNAAF2Q9NVR5 837 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 SH3BP4Q9P0V3 963 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 TMEM181Q9P2C4 612 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 ABCD2Q9UBJ2 740 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 SUCOQ9UBS9 1254 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 BCAP29Q9UHQ4 241 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms