RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 CRHR2Q13324 411 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 ATAT1Q5SQI0 421 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 PAMR1Q6UXH9 720 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 DPY19L3Q6ZPD9 716 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 VASH1Q7L8A9 365 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 OLIG3Q7RTU3 272 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF551Q7Z340 670 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CCDC71Q8IV32 467 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 TRIM63Q969Q1 353 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 COQ8BQ96D53 544 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 PDLIM5Q96HC4 596 aaKnown RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CRELD1Q96HD1 420 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 TXNDC15Q96J42 360 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 HRASLS5Q96KN8 279 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 FYTTD1Q96QD9 318 aaKnown RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 BCL7BQ9BQE9 202 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 TMED9Q9BVK6 235 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 TSSK6Q9BXA6 273 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 HOXD1Q9GZZ0 328 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 NMNAT1Q9HAN9 279 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CACYBPQ9HB71 228 aaKnown RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 TMEM184CQ9NVA4 438 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 COQ3Q9NZJ6 369 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CARD8Q9Y2G2 431 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 GSTK1Q9Y2Q3 226 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 YIPF1Q9Y548 306 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CNTRLQ7Z7A1 2325 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 PDCD11Q14690 1871 aaKnown RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 MEIOCA2RUB1 952 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 ANKRD34BA5PLL1 514 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SCAMP2O15127 329 aaKnown RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 UGT2B17O75795 530 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 ALDH1A1P00352 501 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CLEC2LP0C7M8 214 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 HOXB6P17509 224 aaKnown RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PAX3P23760 479 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 MYL9P24844 172 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 HNMTP50135 292 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CRISP1P54107 249 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 LMAN2Q12907 356 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 MICAQ29983 383 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 DDI2Q5TDH0 399 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 TMCO2Q7Z6W1 182 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PTOV1Q86YD1 416 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 OR8H1Q8NGG4 311 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 LILRB4Q8NHJ6 448 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 RAET1EQ8TD07 263 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 GEMIN6Q8WXD5 167 aaKnown RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SORCS1Q8WY21 1168 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 USP7Q93009 1102 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 POP5Q969H6 163 aaKnown RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CEP295NLQ96MC4 621 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 TBX5Q99593 518 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PSD2Q9BQI7 771 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 WACQ9BTA9 647 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SLC22A4Q9H015 551 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 OSGEPL1Q9H4B0 414 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 MRPL17Q9NRX2 175 aaKnown RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 NDUFAF4Q9P032 175 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PCDH10Q9P2E7 1040 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 ENOPH1Q9UHY7 261 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CLCA2Q9UQC9 943 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 ASF1AQ9Y294 204 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SLC9A8Q9Y2E8 581 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 GPR52Q9Y2T5 361 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 HSPB11Q9Y547 144 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 MYO9BQ13459 2157 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 NYNRINQ9P2P1 1898 aaKnown RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PAPPA2Q9BXP8 1791 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 A0A1B0GVC2 190 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 A0A1W2PQL4 384 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-203ENST00000358528 A6NIN4 97 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SCAMP1O15126 338 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SGTAO43765 313 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 LRG1P02750 347 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 GALTP07902 379 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 TGFBR2P37173 567 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 ARPC4P59998 168 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 DSTNP60981 165 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 ZSWIM7Q19AV6 140 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SMU1Q2TAY7 513 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 GPAT3Q53EU6 434 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CEP78Q5JTW2 689 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 LRIF1Q5T3J3 769 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 KIAA1161Q6NSJ0 714 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PAQR6Q6TCH4 344 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 LHFPL3Q86UP9 236 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 FAM46DQ8NEK8 389 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CYB5D2Q8WUJ1 264 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 GATAD2BQ8WXI9 593 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 OR2B2Q9GZK3 357 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 QPCTLQ9NXS2 382 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 SPG21Q9NZD8 308 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 PTGFRNQ9P2B2 879 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 IL20RAQ9UHF4 553 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 CMAHPQ9Y471 501 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 A0A1W2PQ72 361 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 GLTPD2A6NH11 291 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 DSCR3O14972 297 aa6.3□□□□□ -1.4
CSDE1-203ENST00000358528 GASTP01350 101 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms