RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 RAE1P78406 368 aaKnown RBP14.07□□□□□ -0.16
CCNE1-202ENST00000357943 SHC2P98077 582 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 ACSM2AQ08AH3 577 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 SF3A3Q12874 501 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCNE1-202ENST00000357943 RUNX2Q13950 521 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 ATP6AP1LQ52LC2 224 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 ARHGAP40Q5TG30 622 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 ACSM2BQ68CK6 577 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 NUDT13Q86X67 352 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 MR1Q95460 341 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 CHMP6Q96FZ7 201 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 ZNF578Q96N58 590 aaPredicted RBP14.07□□□□□ -0.16
CCNE1-202ENST00000357943 ROGDIQ9GZN7 287 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 CHST8Q9H2A9 424 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 PFDN4Q9NQP4 134 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 RIC8BQ9NVN3 520 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.07□□□□□ -0.16
CCNE1-202ENST00000357943 ACSL6Q9UKU0 697 aa14.07□□□□□ -0.16
CCNE1-202ENST00000357943 POLR3HQ9Y535 204 aaPredicted RBP14.07□□□□□ -0.16
CCNE1-202ENST00000357943 FER1L5A0AVI2 2057 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 A0A0A6YYD5 115 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.06□□□□□ -0.16
CCNE1-202ENST00000357943 B3GALT2O43825 422 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 RAD1O60671 282 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 TGDSO95455 350 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 PRR35P0CG20 571 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 AGXTP21549 392 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 FBLP22087 321 aaKnown RBP14.06□□□□□ -0.16
CCNE1-202ENST00000357943 CD82P27701 267 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 RPL38P63173 70 aaKnown RBP14.06□□□□□ -0.16
CCNE1-202ENST00000357943 SKP1P63208 163 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 SLAMF1Q13291 335 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 DSG2Q14126 1118 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 TBC1D25Q3MII6 688 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 C6orf136Q5SQH8 315 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 NIPAL1Q6NVV3 410 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 EPGNQ6UW88 154 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 RIPOR1Q6ZS17 1223 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 LARP4Q71RC2 724 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCNE1-202ENST00000357943 PAGE2Q7Z2X7 111 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 DTX1Q86Y01 620 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 NLGN4XQ8N0W4 816 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 CA13Q8N1Q1 262 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 ZCCHC7Q8N3Z6 543 aaKnown RBP14.06□□□□□ -0.16
CCNE1-202ENST00000357943 NLGN4YQ8NFZ3 816 aaPredicted RBP14.06□□□□□ -0.16
CCNE1-202ENST00000357943 RFWD2Q8NHY2 731 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 MAELQ96JY0 434 aaKnown RBP14.06□□□□□ -0.16
CCNE1-202ENST00000357943 PPP3R2Q96LZ3 170 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 EBF4Q9BQW3 602 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 EBPLQ9BY08 206 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 IFT80Q9P2H3 777 aaPredicted RBP14.06□□□□□ -0.16
CCNE1-202ENST00000357943 DCTN4Q9UJW0 460 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 ANGPTL2Q9UKU9 493 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 PADI1Q9ULC6 663 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 DAPP1Q9UN19 280 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 MAP4K5Q9Y4K4 846 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 CEP295Q9C0D2 2601 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 AHCTF1Q8WYP5 2266 aa14.06□□□□□ -0.16
CCNE1-202ENST00000357943 CHST10O43529 356 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 PCDH7O60245 1069 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 DIAPH2O60879 1101 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 ONECUT2O95948 504 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 CCNYL3P0C7X3 344 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 TIA1P31483 386 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCNE1-202ENST00000357943 LIM2P55344 173 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 FOXL2P58012 376 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 TGIF1Q15583 401 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 CCNYL2Q5T2Q4 361 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 MLIPQ5VWP3 458 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 MRM1Q6IN84 353 aaKnown RBP14.05□□□□□ -0.16
CCNE1-202ENST00000357943 NOXRED1Q6NXP6 359 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 GALNT18Q6P9A2 607 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 CYP20A1Q6UW02 462 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 ESX1Q8N693 406 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 FNDC5Q8NAU1 212 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 OR51Q1Q8NH59 317 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 PEX11GQ96HA9 241 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 METTL2AQ96IZ6 378 aaKnown RBP14.05□□□□□ -0.16
CCNE1-202ENST00000357943 OR52B2Q96RD2 323 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 MAPKAP1Q9BPZ7 522 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 DPH2Q9BQC3 489 aaPredicted RBP14.05□□□□□ -0.16
CCNE1-202ENST00000357943 YIPF2Q9BWQ6 316 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 TRIM55Q9BYV6 548 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 KCNK13Q9HB14 408 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 SIRT5Q9NXA8 310 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 TRPC4Q9UBN4 977 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 CTSFQ9UBX1 484 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 MCM8Q9UJA3 840 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 ADAM29Q9UKF5 820 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 FBXW2Q9UKT8 454 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 DLGAP4Q9Y2H0 992 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 LOC400499M0QZD8 3231 aa14.05□□□□□ -0.16
CCNE1-202ENST00000357943 ARHGAP10A1A4S6 786 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 IDH3AP50213 366 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 HNRNPH2P55795 449 aaKnown RBP14.04□□□□□ -0.16
CCNE1-202ENST00000357943 MAP7Q14244 749 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 ERV3-1Q14264 604 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 VWA2Q5GFL6 755 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 FAM198BQ6UWH4 519 aa14.04□□□□□ -0.16
CCNE1-202ENST00000357943 OVCH1Q7RTY7 1134 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms