RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ADA2Q9NZK5 511 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 SLAMF8Q9P0V8 285 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 ATP6V1HQ9UI12 483 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 PRDM4Q9UKN5 801 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 POMPQ9Y244 141 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 NUP214P35658 2090 aaPredicted RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 SPEGQ15772 3267 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 ARHGAP10A1A4S6 786 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 SCELO95171 688 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 ATP6V1G2O95670 118 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 RPLP0P05388 317 aaKnown RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 FURINP09958 794 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 LAMP1P11279 417 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 SLC6A2P23975 617 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 CERS1P27544 350 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 GRK6P43250 576 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 SEPHS1P49903 392 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 BTN3A2P78410 334 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 DAB2P98082 770 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 PDE7AQ13946 482 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 KCNAB1Q14722 419 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 SUZ12Q15022 739 aaKnown RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 MAPKAPK3Q16644 382 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 PRSS53Q2L4Q9 553 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 PRTGQ2VWP7 1150 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 SPATS1Q496A3 300 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 ZNF385BQ569K4 471 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 MANEAQ5SRI9 462 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 C1orf146Q5VVC0 180 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 OR4F3Q6IEY1 312 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 MRM1Q6IN84 353 aaKnown RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 DLEU7Q6UYE1 221 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 IKBIPQ70UQ0 350 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 PRSS42Q7Z5A4 293 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 CAMKMTQ7Z624 323 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 ZCCHC7Q8N3Z6 543 aaKnown RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 GTF2H4Q92759 462 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 COQ8BQ96D53 544 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 ZNF285Q96NJ3 590 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 OR52E6Q96RD3 313 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 SLC39A3Q9BRY0 314 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 KCNH6Q9H252 994 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 IL1RL2Q9HB29 575 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 PDE7BQ9NP56 450 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 TEX10Q9NXF1 929 aaPredicted RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 C15orf38-AP3S2A0A0A6YYH1 394 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 A8MU76 341 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 ZSCAN9O15535 394 aaPredicted RBP17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 SCN2BO60939 215 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 ENTPD5O75356 428 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 FAM58BPP0C7Q3 252 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 ME2P23368 584 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 HPCAL1P37235 193 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 KIR3DL1P43629 444 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 TSFMP43897 325 aaKnown RBP17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 SLC7A2P52569 658 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 PLIN5Q00G26 463 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 KLC1Q07866 573 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 TGM3Q08188 693 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 SLAMF1Q13291 335 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 SAMD4BQ5PRF9 694 aaKnown RBP17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 TMEM71Q6P5X7 295 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 ARPINQ7Z6K5 226 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 DHDDSQ86SQ9 333 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 EFCAB3Q8N7B9 438 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 OR8J2Q8NGG1 315 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 SLC41A2Q96JW4 573 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 LRRN3Q9H3W5 708 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 SERHLQ9NQF3 203 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 CD300AQ9UGN4 299 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 PLCL2Q9UPR0 1127 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 WBP11Q9Y2W2 641 aaKnown RBP17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 ASB4Q9Y574 426 aa17.22■□□□□ 0.35
SMARCD3-202ENST00000356800 SRPX2O60687 465 aaPredicted RBP17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 SORBS2O94875 1100 aaKnown RBP17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 HNRNPFP52597 415 aaKnown RBP17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 TRA2BP62995 288 aaKnown RBP17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 HSD11B2P80365 405 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 SPEM2Q0P670 501 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 DEFB134Q4QY38 66 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 CPTPQ5TA50 214 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 PRSS41Q7RTY9 318 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 GPR180Q86V85 440 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 SLC15A3Q8IY34 581 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 ZNF655Q8N720 491 aaPredicted RBP17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 KLHL6Q8WZ60 621 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 UCN3Q969E3 161 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 CCDC124Q96CT7 223 aaKnown RBP17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 CNDP2Q96KP4 475 aaKnown RBP17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 RMND5AQ9H871 391 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 PDP2Q9P2J9 529 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 MAN2B2Q9Y2E5 1009 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 NEUROG3Q9Y4Z2 214 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 PCDHA9Q9Y5H5 950 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 OTOGLQ3ZCN5 2332 aa17.21■□□□□ 0.35
SMARCD3-202ENST00000356800 PRORSD1PA6NEY8 169 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 URADA6NGE7 173 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 FLRT2O43155 660 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 DNAJB6O75190 326 aa17.2■□□□□ 0.34
SMARCD3-202ENST00000356800 KCNH1O95259 989 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms