RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 CALHM3Q86XJ0 350 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 ST13P4Q8IZP2 240 aaPredicted RBP16.79■□□□□ 0.28
NPAS3-202ENST00000356141 CHCHD4Q8N4Q1 142 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 SPPL2AQ8TCT8 520 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 SETD7Q8WTS6 366 aaKnown RBP16.79■□□□□ 0.28
NPAS3-202ENST00000356141 HSH2DQ96JZ2 352 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 FCRL1Q96LA6 429 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 BDH2Q9BUT1 245 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 RHBGQ9H310 441 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 CXorf36Q9H7Y0 433 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 UBE2ZQ9H832 354 aaPredicted RBP16.79■□□□□ 0.28
NPAS3-202ENST00000356141 PRDM6Q9NQX0 595 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 G3V2T6 193 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 IL9P15248 144 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 BSGP35613 385 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 PRIM2P49643 509 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 MANFP55145 182 aaKnown RBP16.79■□□□□ 0.28
NPAS3-202ENST00000356141 MERTKQ12866 999 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 SRSF5Q13243 272 aaKnown RBP16.79■□□□□ 0.28
NPAS3-202ENST00000356141 NFATC4Q14934 902 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 C18orf63Q68DL7 685 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 FAM71E1Q6IPT2 247 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 CHERPQ8IWX8 916 aaKnown RBP16.79■□□□□ 0.28
NPAS3-202ENST00000356141 TRIM48Q8IWZ4 208 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 MARVELD2Q8N4S9 558 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 DUS3LQ96G46 650 aaKnown RBP16.79■□□□□ 0.28
NPAS3-202ENST00000356141 REXO5Q96IC2 774 aaKnown RBP16.79■□□□□ 0.28
NPAS3-202ENST00000356141 C9orf16Q9BUW7 83 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 SRMSQ9H3Y6 488 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 LMAN1LQ9HAT1 526 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 FANCMQ8IYD8 2048 aa16.79■□□□□ 0.28
NPAS3-202ENST00000356141 OR6C74A6NCV1 312 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 FAM220BPB1ANY3 271 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 BOLA2-SMG1P6H3BVE0 249 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 FOXE1O00358 373 aaPredicted RBP16.78■□□□□ 0.28
NPAS3-202ENST00000356141 DENRO43583 198 aaKnown RBP16.78■□□□□ 0.28
NPAS3-202ENST00000356141 SMIM18P0DKX4 95 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 HSD3B1P14060 373 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 HSD3B2P26439 372 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 ELK4P28324 431 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 FEN1P39748 380 aaKnown RBP16.78■□□□□ 0.28
NPAS3-202ENST00000356141 PHEXP78562 749 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 LRRC74AQ0VAA2 488 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 AGERQ15109 404 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 SPDYE7PQ495Y7 208 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 TMTC4Q5T4D3 741 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 AMIGO1Q86WK6 493 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.78■□□□□ 0.28
NPAS3-202ENST00000356141 OR2L3Q8NG85 312 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 ZFP90Q8TF47 636 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 SGCDQ92629 289 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 UGT2B28Q9BY64 529 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 RHCGQ9UBD6 479 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 MMP17Q9ULZ9 603 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 LRRC72A6NJI9 287 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 PGRMC2O15173 223 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 DEAF1O75398 565 aaPredicted RBP16.78■□□□□ 0.28
NPAS3-202ENST00000356141 PKLRP30613 574 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 CDK9P50750 372 aaKnown RBP16.78■□□□□ 0.28
NPAS3-202ENST00000356141 RNF144AP50876 292 aaPredicted RBP16.78■□□□□ 0.28
NPAS3-202ENST00000356141 ID2Q02363 134 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 DEFB110Q30KQ9 67 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 CEP68Q76N32 757 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 OR4N5Q8IXE1 308 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 OR5D16Q8NGK9 328 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 TMIGD2Q96BF3 282 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 TM4SF18Q96CE8 201 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 DHRS1Q96LJ7 313 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 TIMM29Q9BSF4 260 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 KDELR2P33947 212 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 PIGAP37287 484 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 CRYBA2P53672 197 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 MAPK10P53779 464 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 GPR18Q14330 331 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 TOR1AIP1Q5JTV8 583 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 EOGTQ5NDL2 527 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 ZDHHC13Q8IUH4 622 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 RAB42Q8N4Z0 105 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 METTL25Q8N6Q8 603 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 PYURFQ96I23 114 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 MAGEB10Q96LZ2 347 aaPredicted RBP16.78■□□□□ 0.28
NPAS3-202ENST00000356141 SLC6A18Q96N87 628 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 GORASP2Q9H8Y8 452 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 EQTNQ9NQ60 294 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 TMEM74BQ9NUR3 256 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 COLQQ9Y215 455 aaPredicted RBP16.78■□□□□ 0.28
NPAS3-202ENST00000356141 SH3GLB1Q9Y371 365 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 N6AMT1Q9Y5N5 214 aa16.78■□□□□ 0.28
NPAS3-202ENST00000356141 SPAG17Q6Q759 2223 aa16.77■□□□□ 0.28
NPAS3-202ENST00000356141 C1orf226A1L170 272 aa16.77■□□□□ 0.28
NPAS3-202ENST00000356141 B4DGG1 531 aa16.77■□□□□ 0.28
NPAS3-202ENST00000356141 J3KTA2 159 aa16.77■□□□□ 0.28
NPAS3-202ENST00000356141 SDC3O75056 442 aa16.77■□□□□ 0.28
NPAS3-202ENST00000356141 SCELO95171 688 aa16.77■□□□□ 0.28
NPAS3-202ENST00000356141 IGHV4-34P06331 123 aa16.77■□□□□ 0.28
NPAS3-202ENST00000356141 PIGFQ07326 219 aa16.77■□□□□ 0.28
NPAS3-202ENST00000356141 TJAP1Q5JTD0 557 aa16.77■□□□□ 0.28
NPAS3-202ENST00000356141 TAF8Q7Z7C8 310 aa16.77■□□□□ 0.28
NPAS3-202ENST00000356141 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.77■□□□□ 0.28
NPAS3-202ENST00000356141 COL26A1Q96A83 441 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms