RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 HOXB9P17482 250 aaPredicted RBP19.52■□□□□ 0.72
TRIM4-202ENST00000354241 EPHA4P54764 986 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 BTN3A2P78410 334 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 PRSS53Q2L4Q9 553 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 HLA-BQ31612 363 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 NKAIN2Q5VXU1 208 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 PEAR1Q5VY43 1037 aaPredicted RBP19.52■□□□□ 0.72
TRIM4-202ENST00000354241 CYP2R1Q6VVX0 501 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 SPATA24Q86W54 205 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 ENDOVQ8N8Q3 282 aaKnown RBP19.52■□□□□ 0.72
TRIM4-202ENST00000354241 OR4A15Q8NGL6 344 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 TGM7Q96PF1 710 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 IKZF5Q9H5V7 419 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 USP22Q9UPT9 525 aa19.52■□□□□ 0.72
TRIM4-202ENST00000354241 SP9P0CG40 484 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 TSFMP43897 325 aaKnown RBP19.51■□□□□ 0.71
TRIM4-202ENST00000354241 HNRNPFP52597 415 aaKnown RBP19.51■□□□□ 0.71
TRIM4-202ENST00000354241 OR1D5P58170 312 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 AP2B1P63010 937 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 DHFR2Q86XF0 187 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 UTP15Q8TED0 518 aaKnown RBP19.51■□□□□ 0.71
TRIM4-202ENST00000354241 NCSTNQ92542 709 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 AHCYL2Q96HN2 611 aaKnown RBP19.51■□□□□ 0.71
TRIM4-202ENST00000354241 CCDC3Q9BQI4 270 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 CPPED1Q9BRF8 314 aaPredicted RBP19.51■□□□□ 0.71
TRIM4-202ENST00000354241 S100A14Q9HCY8 104 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 FAM60AQ9NP50 221 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 URADA6NGE7 173 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 NUDT21O43809 227 aaKnown RBP19.51■□□□□ 0.71
TRIM4-202ENST00000354241 ABCB1P08183 1280 aaPredicted RBP19.51■□□□□ 0.71
TRIM4-202ENST00000354241 GFERP55789 205 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 VSX2P58304 361 aaPredicted RBP19.51■□□□□ 0.71
TRIM4-202ENST00000354241 LRRC74AQ0VAA2 488 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 MPEG1Q2M385 716 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 DEFB110Q30KQ9 67 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 AAGABQ6PD74 315 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 ZCCHC7Q8N3Z6 543 aaKnown RBP19.51■□□□□ 0.71
TRIM4-202ENST00000354241 ZNF655Q8N720 491 aaPredicted RBP19.51■□□□□ 0.71
TRIM4-202ENST00000354241 OR10A6Q8NH74 314 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 LRGUKQ96M69 825 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 C1GALT1Q9NS00 363 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 NLGN3Q9NZ94 848 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 FBXW2Q9UKT8 454 aa19.51■□□□□ 0.71
TRIM4-202ENST00000354241 KIF1CO43896 1103 aaKnown RBP19.5■□□□□ 0.71
TRIM4-202ENST00000354241 GLB1P16278 677 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 MRPS22P82650 360 aaKnown RBP19.5■□□□□ 0.71
TRIM4-202ENST00000354241 SUZ12Q15022 739 aaKnown RBP19.5■□□□□ 0.71
TRIM4-202ENST00000354241 LPAL2Q16609 132 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 ZNF528Q3MIS6 628 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 NDUFAF5Q5TEU4 345 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 FAM180BQ6P0A1 224 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 FAM47BQ8NA70 645 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 RSRC1Q96IZ7 334 aaKnown RBP19.5■□□□□ 0.71
TRIM4-202ENST00000354241 FAIM2Q9BWQ8 316 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 GAREM1Q9H706 876 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 C5AR2Q9P296 337 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 PCDHGB4Q9UN71 923 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 ERVK-11Q9UQG0 969 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 PCDH15Q96QU1 1955 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 CABIN1Q9Y6J0 2220 aa19.5■□□□□ 0.71
TRIM4-202ENST00000354241 PATE3B3GLJ2 98 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 EPN2O95208 641 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 C6orf47O95873 294 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 AVPR2P30518 371 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 OR4D2P58180 307 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 SNRPNP63162 240 aaKnown RBP19.49■□□□□ 0.71
TRIM4-202ENST00000354241 ANGPT1Q15389 498 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 MRM1Q6IN84 353 aaKnown RBP19.49■□□□□ 0.71
TRIM4-202ENST00000354241 KANSL1Q7Z3B3 1105 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 CSNK1A1LQ8N752 337 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 Q8N9G6 341 aaPredicted RBP19.49■□□□□ 0.71
TRIM4-202ENST00000354241 UCN3Q969E3 161 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 EXOSC8Q96B26 276 aaKnown RBP19.49■□□□□ 0.71
TRIM4-202ENST00000354241 KLHL3Q9UH77 587 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 VPS4AQ9UN37 437 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 AP3M1Q9Y2T2 418 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 ASB4Q9Y574 426 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 A0A1W2PRB8 838 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 HCRTR1O43613 425 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 GUCY1B2O75343 617 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 ALPPL2P10696 532 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 DDX5P17844 614 aaKnown RBP19.49■□□□□ 0.71
TRIM4-202ENST00000354241 ATP6V1B2P21281 511 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 HTR1EP28566 365 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 HOXD12P35452 270 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 SESN3P58005 492 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 COL9A2Q14055 689 aaPredicted RBP19.49■□□□□ 0.71
TRIM4-202ENST00000354241 ZCCHC8Q6NZY4 707 aaKnown RBP19.49■□□□□ 0.71
TRIM4-202ENST00000354241 ABHD13Q7L211 337 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 ZBTB44Q8NCP5 570 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 CEP76Q8TAP6 659 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 SAP25Q8TEE9 199 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 ZDHHC12Q96GR4 267 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 ZNF583Q96ND8 569 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 DUSP23Q9BVJ7 150 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 TRIM15Q9C019 465 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 PADI4Q9UM07 663 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 SNX13Q9Y5W8 968 aa19.49■□□□□ 0.71
TRIM4-202ENST00000354241 IGHV1OR21-1A0A087WYE8 117 aa19.48■□□□□ 0.71
TRIM4-202ENST00000354241 EVPLLA8MZ36 301 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms