RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 AP4S1Q9Y587 144 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 SNX13Q9Y5W8 968 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 CSNK1G3Q9Y6M4 447 aa7.86□□□□□ -1.15
CD44-205ENST00000352818 TRBV5-3A0A0A0MS03 114 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 MGAT4DA6NG13 374 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 KIAA1324LA8MWY0 1029 aaPredicted RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 C9JVG2 144 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 ARPC2O15144 300 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 SLC31A1O15431 190 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 PLRG1O43660 514 aaKnown RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 RNASEH1O60930 286 aaKnown RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 SEC22BO75396 215 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 KCNH1O95259 989 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 NADKO95544 446 aaPredicted RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 BCKDHAP12694 445 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 UQCRBP14927 111 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 AMD1P17707 334 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 TCN1P20061 433 aaPredicted RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 ACADLP28330 430 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 HALP42357 657 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 BDKRB1P46663 353 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 PREPP48147 710 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 CLDN8P56748 225 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 TAS2R38P59533 333 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 HNRNPKP61978 463 aaKnown RBP eCLIP7.85□□□□□ -1.15
CD44-205ENST00000352818 IRF8Q02556 426 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 LIPEQ05469 1076 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 CAPRIN1Q14444 709 aaKnown RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 C16orf72Q14CZ0 275 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 CPSF6Q16630 551 aaKnown RBP eCLIP7.85□□□□□ -1.15
CD44-205ENST00000352818 SFT2D3Q587I9 215 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 LRIF1Q5T3J3 769 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 CAPN13Q6MZZ7 669 aaPredicted RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 NANOGP8Q6NSW7 305 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 SUSD1Q6UWL2 747 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 ABI3BPQ7Z7G0 1075 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 C11orf96Q7Z7L8 435 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 TRAPPC5Q8IUR0 188 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 ZNF547Q8IVP9 402 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 SDR16C5Q8N3Y7 309 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 LILRA3Q8N6C8 439 aaPredicted RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 ANKFN1Q8N957 763 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 ICA1LQ8NDH6 482 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 OR52E4Q8NGH9 312 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 WDR20Q8TBZ3 569 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 N4BP2L2Q92802 583 aaPredicted RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 KLK6Q92876 244 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 NAT6Q93015 286 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 CCDC74AQ96AQ1 378 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 REPS1Q96D71 796 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 GFM1Q96RP9 751 aaKnown RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 HBEGFQ99075 208 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 PKP2Q99959 881 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 KCTD14Q9BQ13 255 aaPredicted RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 SGPP1Q9BX95 441 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 TEX101Q9BY14 249 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 B3GNT4Q9C0J1 378 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 PCDHAC1Q9H158 963 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 OR2AG1Q9H205 316 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 OR52A5Q9H2C5 316 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 VCXQ9H320 206 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 ALG2Q9H553 416 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 NANOGQ9H9S0 305 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 C8orf4Q9NR00 106 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 CCM2LQ9NUG4 571 aaPredicted RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 GULP1Q9UBP9 304 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 MAGEL2Q9UJ55 1249 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 RAB26Q9ULW5 256 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 PPT2Q9UMR5 302 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 SLC22A14Q9Y267 594 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 TSC22D4Q9Y3Q8 395 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 PCDHB3Q9Y5E6 796 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 VPS13CQ709C8 3753 aa7.85□□□□□ -1.15
CD44-205ENST00000352818 NSD1Q96L73 2696 aaPredicted RBP7.85□□□□□ -1.15
CD44-205ENST00000352818 DIDO1Q9BTC0 2240 aaKnown RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 A0A096LPI6 279 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 TCRBV5S2A0A599 114 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 DHRS12A0PJE2 317 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 MAGEA13PA6NCF6 341 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 TMX2-CTNND1H3BSU7 103 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 AQP9O43315 295 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 DENRO43583 198 aaKnown RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 ERN1O75460 977 aaKnown RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 SLC16A8O95907 504 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 RPLP0P05388 317 aaKnown RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 PGRP06401 933 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 ERGP11308 486 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 FCGR1AP12314 374 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 BMP2P12643 396 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 DRD2P14416 443 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 ZNF8P17098 575 aaPredicted RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 HOXB9P17482 250 aaPredicted RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 HOXB6P17509 224 aaKnown RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 CD22P20273 847 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 PSMA4P25789 261 aaKnown RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 PDHA2P29803 388 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 PBLDP30039 288 aaPredicted RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 MSX2P35548 267 aaPredicted RBP7.84□□□□□ -1.15
CD44-205ENST00000352818 NUDT1P36639 197 aa7.84□□□□□ -1.15
CD44-205ENST00000352818 AQP4P55087 323 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms