RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 FAM182BQ5T319 152 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 SUSD1Q6UWL2 747 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 ZNF730Q6ZMV8 503 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 PTCHD4Q6ZW05 846 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 GPR65Q8IYL9 337 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 TRAPPC12Q8WVT3 735 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 SCMH1Q96GD3 660 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 IL4I1Q96RQ9 567 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 DPH2Q9BQC3 489 aaPredicted RBP12.72□□□□□ -0.37
IFT88-202ENST00000351808 MRIQ9BWK5 157 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 ARHGAP39Q9C0H5 1083 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 DERL2Q9GZP9 239 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 CLMPQ9H6B4 373 aa12.72□□□□□ -0.37
IFT88-202ENST00000351808 FFAR3O14843 346 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 GPR42O15529 346 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 JUPP14923 745 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 HNF1BP35680 557 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 RECQLP46063 649 aaPredicted RBP12.71□□□□□ -0.37
IFT88-202ENST00000351808 SUOXP51687 545 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 PPP3R1P63098 170 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 MPPE1Q53F39 396 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 SGO1Q5FBB7 561 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 PDSS1Q5T2R2 415 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 CTU1Q7Z7A3 348 aaKnown RBP12.71□□□□□ -0.37
IFT88-202ENST00000351808 BMPERQ8N8U9 685 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 COQ8AQ8NI60 647 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 HGDQ93099 445 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 NTAN1Q96AB6 310 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 OTUB1Q96FW1 271 aaPredicted RBP12.71□□□□□ -0.37
IFT88-202ENST00000351808 C7orf34Q96L11 122 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 SFXN2Q96NB2 322 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 C1QTNF3Q9BXJ4 246 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 CLN6Q9NWW5 311 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 EMC3Q9P0I2 261 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 MLXQ9UH92 298 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 ERVK-19Q9WJR5 959 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 CLDN5O00501 218 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 GLP2RO95838 553 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 S100A6P06703 90 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 HNMTP50135 292 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 KIAA1024LP59773 190 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 RPS7P62081 194 aaKnown RBP12.71□□□□□ -0.37
IFT88-202ENST00000351808 PLA1AQ53H76 456 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 NLRC3Q7RTR2 1065 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 PAQR7Q86WK9 346 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 BEST4Q8NFU0 473 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 PPP3R2Q96LZ3 170 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 NELL2Q99435 816 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 AARSD1Q9BTE6 412 aaKnown RBP12.71□□□□□ -0.37
IFT88-202ENST00000351808 TKTL2Q9H0I9 626 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 EDARQ9UNE0 448 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 PLCL2Q9UPR0 1127 aa12.71□□□□□ -0.37
IFT88-202ENST00000351808 C7orf66A4D0T2 115 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 TUBAL3A6NHL2 446 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 H7C2Y5 167 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 SGK494L7N484 410 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 SIGLEC6O43699 453 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 LANCL1O43813 399 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 SH3BP5O60239 455 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 MAFKO60675 156 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 NMBP08949 121 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 CD9P21926 228 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 RPL9P32969 192 aaKnown RBP12.71□□□□□ -0.38
IFT88-202ENST00000351808 EVX1P49640 407 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 ARHGDIBP52566 201 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 MAXP61244 160 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 MBTD1Q05BQ5 628 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 SCAPQ12770 1279 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 ADAM15Q13444 863 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 OPCMLQ14982 345 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 PTGES3Q15185 160 aaKnown RBP12.71□□□□□ -0.38
IFT88-202ENST00000351808 FAM187BQ17R55 369 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 VMACQ2NL98 169 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 C3P1Q6ZMU1 363 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 CBLL1Q75N03 491 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 UNC93AQ86WB7 457 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 OR9Q2Q8NGE9 314 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 AP3S1Q92572 193 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 SCRN2Q96FV2 425 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 HTATIP2Q9BUP3 242 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 KCNH6Q9H252 994 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 DLL4Q9NR61 685 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 CTSFQ9UBX1 484 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 HCN2Q9UL51 889 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 GINS2Q9Y248 185 aa12.71□□□□□ -0.38
IFT88-202ENST00000351808 WASH4PA8MWX3 477 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 ENTPD6O75354 484 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 APOL3O95236 402 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 FABP1P07148 127 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 TNFRSF1BP20333 461 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 PTPN6P29350 595 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 ALDH9A1P49189 494 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 LRIF1Q5T3J3 769 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 CD276Q5ZPR3 534 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 HTR3DQ70Z44 454 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 FAM9CQ8IZT9 166 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 BVESQ8NE79 360 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 OR2T35Q8NGX2 323 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 NANPQ8TBE9 248 aa12.7□□□□□ -0.38
IFT88-202ENST00000351808 HASPINQ8TF76 798 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms