RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 KELP23276 732 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 TGFBR2P37173 567 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 OR1E2P47887 323 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 SLC6A11P48066 632 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 CDH12P55289 794 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 LGI4Q8N135 537 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 OR5AK3PQ8NH89 298 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 DYNC2LI1Q8TCX1 351 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 IL17FQ96PD4 163 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 SLC6A16Q9GZN6 736 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 FKBP14Q9NWM8 211 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 TAAR2Q9P1P5 351 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 PSORS1C1Q9UIG5 152 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 ANGPT4Q9Y264 503 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 MAP4K5Q9Y4K4 846 aa21.15■□□□□ 0.98
UPF3A-201ENST00000351487 CLDN24A6NM45 220 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 TPP2P29144 1249 aaPredicted RBP21.14■□□□□ 0.98
UPF3A-201ENST00000351487 XCR1P46094 333 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 LIMS1P48059 325 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 KCNC4Q03721 635 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 CYP2A13Q16696 494 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 DGUOKQ16854 277 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 Q6ZPB1 254 aaPredicted RBP21.14■□□□□ 0.98
UPF3A-201ENST00000351487 ARMC8Q8IUR7 673 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 S100ZQ8WXG8 99 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 COX14Q96I36 57 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 TMEM245Q9H330 911 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 MIEF1Q9NQG6 463 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 RLIMQ9NVW2 624 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 TDRKHQ9Y2W6 561 aaKnown RBP21.14■□□□□ 0.98
UPF3A-201ENST00000351487 PCYT1BQ9Y5K3 369 aaPredicted RBP21.14■□□□□ 0.98
UPF3A-201ENST00000351487 PLXND1Q9Y4D7 1925 aa21.14■□□□□ 0.98
UPF3A-201ENST00000351487 SEMA3DO95025 777 aa21.14■□□□□ 0.97
UPF3A-201ENST00000351487 OCM2P0CE71 109 aa21.14■□□□□ 0.97
UPF3A-201ENST00000351487 OCMP0CE72 109 aaPredicted RBP21.14■□□□□ 0.97
UPF3A-201ENST00000351487 GRK3P35626 688 aa21.14■□□□□ 0.97
UPF3A-201ENST00000351487 VBP1P61758 197 aa21.14■□□□□ 0.97
UPF3A-201ENST00000351487 TBCEQ15813 527 aaPredicted RBP21.14■□□□□ 0.97
UPF3A-201ENST00000351487 EXOC3L2Q2M3D2 409 aa21.14■□□□□ 0.97
UPF3A-201ENST00000351487 RGS21Q2M5E4 152 aa21.14■□□□□ 0.97
UPF3A-201ENST00000351487 OR5AR1Q8NGP9 310 aa21.14■□□□□ 0.97
UPF3A-201ENST00000351487 RHOXF1Q8NHV9 184 aa21.14■□□□□ 0.97
UPF3A-201ENST00000351487 COPS4Q9BT78 406 aa21.14■□□□□ 0.97
UPF3A-201ENST00000351487 RHBGQ9H310 441 aa21.14■□□□□ 0.97
UPF3A-201ENST00000351487 FBXO8Q9NRD0 319 aa21.14■□□□□ 0.97
UPF3A-201ENST00000351487 DNAAF2Q9NVR5 837 aaKnown RBP21.14■□□□□ 0.97
UPF3A-201ENST00000351487 DEC1Q9P2X7 70 aa21.14■□□□□ 0.97
UPF3A-201ENST00000351487 NFATC1O95644 943 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 VIPP01282 170 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 LCKP06239 509 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 UQCRC2P22695 453 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 SOAT1P35610 550 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 VIPR2P41587 438 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 SERPINB10P48595 397 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 HMGA2P52926 109 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 ZNF234Q14588 700 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 ZNF605Q86T29 641 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 DNAJC22Q8N4W6 341 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 TMCO5AQ8N6Q1 288 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 PHF10Q8WUB8 498 aaKnown RBP21.13■□□□□ 0.97
UPF3A-201ENST00000351487 PIP5K1AQ99755 562 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 ITPAQ9BY32 194 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 AHSPQ9NZD4 102 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 TLL1O43897 1013 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 ARHGAP19Q14CB8 494 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 NIPSNAP1Q9BPW8 284 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 TMEM121BQ9BXQ6 578 aaPredicted RBP21.13■□□□□ 0.97
UPF3A-201ENST00000351487 ZNF717Q9BY31 904 aaPredicted RBP21.13■□□□□ 0.97
UPF3A-201ENST00000351487 DYRK4Q9NR20 520 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 PLAGL1Q9UM63 463 aa21.13■□□□□ 0.97
UPF3A-201ENST00000351487 WBP11Q9Y2W2 641 aaKnown RBP21.13■□□□□ 0.97
UPF3A-201ENST00000351487 PRAMEF33A0A0G2JMD5 474 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 PLPP1O14494 284 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 TBX19O60806 448 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 PRAMEF10O60809 474 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 TBX6O95947 436 aaPredicted RBP21.12■□□□□ 0.97
UPF3A-201ENST00000351487 HNRNPCP07910 306 aaKnown RBP eCLIP21.12■□□□□ 0.97
UPF3A-201ENST00000351487 GABRB1P18505 474 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 ALDH4A1P30038 563 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 DSTNP60981 165 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 ADAMTSL4Q6UY14 1074 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 CCDC103Q8IW40 242 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 MMP21Q8N119 569 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 OR52J3Q8NH60 311 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 SNRNP27Q8WVK2 155 aaKnown RBP21.12■□□□□ 0.97
UPF3A-201ENST00000351487 MYDGFQ969H8 173 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 SORBS1Q9BX66 1292 aaKnown RBP21.12■□□□□ 0.97
UPF3A-201ENST00000351487 BTBD2Q9BX70 525 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 PELI2Q9HAT8 420 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 ACER3Q9NUN7 267 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 ARRDC5A6NEK1 342 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 OTOL1A6NHN0 477 aaPredicted RBP21.12■□□□□ 0.97
UPF3A-201ENST00000351487 NADKO95544 446 aaPredicted RBP21.12■□□□□ 0.97
UPF3A-201ENST00000351487 CD36P16671 472 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 DDCP20711 480 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 NCS1P62166 190 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 LSM3P62310 102 aaKnown RBP21.12■□□□□ 0.97
UPF3A-201ENST00000351487 AMZ2Q86W34 360 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 C17orf64Q86WR6 236 aa21.12■□□□□ 0.97
UPF3A-201ENST00000351487 DEPDC4Q8N2C3 294 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms