RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ZNF354BQ96LW1 612 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 MESP1Q9BRJ9 268 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 MS4A8Q9BY19 250 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 PRTFDC1Q9NRG1 225 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 AGPAT4Q9NRZ5 378 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 ZNF358Q9NW07 568 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 LUZP4Q9P127 313 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 TBK1Q9UHD2 729 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 BLACEA4D250 179 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 OR2W5A6NFC9 320 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 PRAMEF4O60810 478 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 SORBS2O94875 1100 aaKnown RBP14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 SIX3O95343 332 aaPredicted RBP14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 GSTA1P08263 222 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 KRT15P19012 456 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 ZNF33BQ06732 778 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 ZNF169Q14929 603 aaPredicted RBP14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 IGFBP7Q16270 282 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 CPSF6Q16630 551 aaKnown RBP eCLIP14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 PLEKHN1Q494U1 663 aaPredicted RBP14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 PRAMEF9Q5VWM5 478 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 KHDRBS2Q5VWX1 349 aaKnown RBP14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 B3GNTL1Q67FW5 361 aaPredicted RBP14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 GSPT2Q8IYD1 628 aaKnown RBP14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 TSLPQ969D9 159 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 TXLNGYQ9BZA5 131 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.82□□□□□ -0.043e-7■■■■■ 28.3
TSPAN4-201ENST00000346501 NOL11Q9H8H0 719 aaKnown RBP14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 LYRM4Q9HD34 91 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 MS4A12Q9NXJ0 267 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 STMN3Q9NZ72 180 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 DCDC2Q9UHG0 476 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 TSC22D4Q9Y3Q8 395 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 COPG1Q9Y678 874 aaKnown RBP14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 PCSK5Q92824 1860 aa14.82□□□□□ -0.04
TSPAN4-201ENST00000346501 TRAV17A0A0B4J275 112 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 H0YIV9 168 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 E2F3O00716 465 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 OTCP00480 354 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 ITGAMP11215 1152 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 MAOAP21397 527 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 CERS1P27544 350 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 TLX1P31314 330 aaPredicted RBP14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 ARFIP1P53367 373 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 STX4Q12846 297 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 IFT88Q13099 833 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 RUNX2Q13950 521 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 MEP1AQ16819 746 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 DEPDC1Q5TB30 811 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 VN1R5Q7Z5H4 357 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 MILR1Q7Z6M3 343 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 SLC22A9Q8IVM8 553 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 L3MBTL4Q8NA19 623 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 GALNT11Q8NCW6 608 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 HUS1BQ8NHY5 278 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 HAS2Q92819 552 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 MIB2Q96AX9 1013 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 QRFPRQ96P65 431 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 MTERF1Q99551 399 aaKnown RBP14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 ZBTB20Q9HC78 741 aaPredicted RBP14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 MMP25Q9NPA2 562 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 DAPP1Q9UN19 280 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 PLAAQ9Y263 795 aa14.81□□□□□ -0.04
TSPAN4-201ENST00000346501 DOCK10Q96BY6 2186 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 TCRBV16S1A1N1A0A5B0 115 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 LRRC14BA6NHZ5 514 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 FAM227AF5H4B4 570 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 DYRK3O43781 588 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 ZNF500O60304 480 aaPredicted RBP14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 SH3BGRLO75368 114 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 SLU7O95391 586 aaKnown RBP14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 IFNA16P05015 189 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 HIST1H1TP22492 207 aaPredicted RBP14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 CPN2P22792 545 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 ATP5A1P25705 553 aaKnown RBP14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 SOX11P35716 441 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 CCT5P48643 541 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 LIM2P55344 173 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 SLC26A5P58743 744 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 BTG2P78543 158 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 ELOAQ14241 798 aaKnown RBP14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 ZRSR2Q15696 482 aaKnown RBP14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 OR4C11Q6IEV9 310 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 CISD2Q8N5K1 135 aaKnown RBP14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 HORMAD2Q8N7B1 307 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 ACOT4Q8N9L9 421 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 FAM47BQ8NA70 645 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 LRRN4CLQ8ND94 238 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 OR1N1Q8NGS0 311 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 CCDC126Q96EE4 140 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 SERPINI1Q99574 410 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 NTMT1Q9BV86 223 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 RNF32Q9H0A6 362 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 OR51B5Q9H339 312 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 ELOVL6Q9H5J4 265 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 WDR41Q9HAD4 459 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 DMRT3Q9NQL9 472 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 PRDM7Q9NQW5 492 aa14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 PNO1Q9NRX1 252 aaKnown RBP14.8□□□□□ -0.04
TSPAN4-201ENST00000346501 NMRK1Q9NWW6 199 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms