RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 FAM189A2Q15884 450 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 OR4F3Q6IEY1 312 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 ENPP6Q6UWR7 440 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 EID2Q8N6I1 236 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 OR4C6Q8NH72 309 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 SLC5A11Q8WWX8 675 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 MYDGFQ969H8 173 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 THSD1Q9NS62 852 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 ZCCHC3Q9NUD5 404 aaKnown RBP10.48□□□□□ -0.73
CLCN6-202ENST00000346436 SLC6A14Q9UN76 642 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 PCDHGB7Q9Y5F8 929 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 KIR2DS5A0A0G2JLQ3 304 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 A0A0G2JNG1 304 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 GRXCR1A8MXD5 290 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 LOC730098B7Z3J9 87 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 KIR2DS3K7RE56 304 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 DENRO43583 198 aaKnown RBP10.48□□□□□ -0.73
CLCN6-202ENST00000346436 CLDN7O95471 211 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 ICAM2P13598 275 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 DNAJA1P31689 397 aaKnown RBP10.48□□□□□ -0.73
CLCN6-202ENST00000346436 CDKN1CP49918 316 aaPredicted RBP10.48□□□□□ -0.73
CLCN6-202ENST00000346436 RPS15AP62244 130 aaKnown RBP10.48□□□□□ -0.73
CLCN6-202ENST00000346436 KIR2DS5Q14953 304 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 PLEKHS1Q5SXH7 462 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 CATSPEREQ5SY80 951 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 UGT2A3Q6UWM9 527 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 TTC9BQ8N6N2 239 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 KIAA1191Q96A73 305 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 RBP7Q96R05 134 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 ZDHHC5Q9C0B5 715 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 UBAP1Q9NZ09 502 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 GFRA2O00451 464 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 NME4O00746 187 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 PGLSO95336 258 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 HEXAP06865 529 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 CDH12P55289 794 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 ECH1Q13011 328 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 TGFBIQ15582 683 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 ANKRD26P1Q6NSI1 321 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 PTCHD4Q6ZW05 846 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 SYNPOQ8N3V7 929 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 PTERQ96BW5 349 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 TAMM41Q96BW9 452 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 TSGA13Q96PP4 275 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 SMIM14Q96QK8 99 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 CCNL2Q96S94 520 aaPredicted RBP10.48□□□□□ -0.73
CLCN6-202ENST00000346436 MRM3Q9HC36 420 aaKnown RBP10.48□□□□□ -0.73
CLCN6-202ENST00000346436 TMEM9BQ9NQ34 198 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 HEBP1Q9NRV9 189 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 HSFX1Q9UBD0 423 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 AP1M2Q9Y6Q5 423 aa10.48□□□□□ -0.73
CLCN6-202ENST00000346436 COL16A1Q07092 1604 aaPredicted RBP10.48□□□□□ -0.73
CLCN6-202ENST00000346436 IGLON5A6NGN9 336 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 SCELO95171 688 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 PRAMEF12O95522 483 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 ASGR2P07307 311 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 IGFBP6P24592 240 aaPredicted RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 IST1P53990 364 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 GPRC6AQ5T6X5 926 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 MFSD6LQ8IWD5 586 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 KRTCAP2Q8N6L1 136 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 OR52B6Q8NGF0 335 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 KHSRPQ92945 711 aaKnown RBP eCLIP10.47□□□□□ -0.737e-7■■□□□ 13.5
CLCN6-202ENST00000346436 FATE1Q969F0 183 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 GLYATL1Q969I3 302 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 LRCH3Q96II8 777 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 GPATCH1Q9BRR8 931 aaKnown RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 G6PC3Q9BUM1 346 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 PIGUQ9H490 435 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 CMTM6Q9NX76 183 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 CDK5RAP2Q96SN8 1893 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 AZGP1P25311 298 aaKnown RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 MNDAP41218 407 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 SLC6A9P48067 706 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 NTHL1P78549 312 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 MEF2AQ02078 507 aaPredicted RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 HYAL2Q12891 473 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 TMEM44Q2T9K0 475 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 PSAPL1Q6NUJ1 521 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 PNLDC1Q8NA58 520 aaKnown RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 TRPV1Q8NER1 839 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 OR5M3Q8NGP4 307 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 OBP2AQ9NY56 170 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 CFAP20Q9Y6A4 193 aaKnown RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 DNAJC25-GNG10A0A024R161 153 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 TNFRSF11BO00300 401 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 TPST2O60704 377 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 GNAO1P09471 354 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 CAPN3P20807 821 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 HSD11B1P28845 292 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 C6orf136Q5SQH8 315 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 ISCA2Q86U28 154 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 GLB1L3Q8NCI6 653 aaPredicted RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 PHOSPHO1Q8TCT1 267 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 BTBD3Q9Y2F9 522 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 POFUT2Q9Y2G5 429 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 DLEC1Q9Y238 1755 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 ZNF99A8MXY4 864 aaPredicted RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 CHST10O43529 356 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 CDK4P11802 303 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms