RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 CATSPER1Q8NEC5 780 aa15.09■□□□□ 0.01
ATG4B-201ENST00000344376 SCYL1Q96KG9 808 aa15.09■□□□□ 0.01
ATG4B-201ENST00000344376 RHOXF2Q9BQY4 288 aa15.09■□□□□ 0.01
ATG4B-201ENST00000344376 CENPKQ9BS16 269 aa15.09■□□□□ 0.01
ATG4B-201ENST00000344376 ACTR8Q9H981 624 aa15.09■□□□□ 0.01
ATG4B-201ENST00000344376 ASH1LQ9NR48 2969 aaKnown RBP15.08■□□□□ 0.01
ATG4B-201ENST00000344376 TCRBV16S1A1N1A0A5B0 115 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 SYNDIG1LA6NDD5 238 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 OR5H15A6NDH6 313 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 TRIM49D1C9J1S8 452 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 FAM227AF5H4B4 570 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 KLK8O60259 260 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 WDPCPO95876 746 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 COL6A2P12110 1019 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 MAOAP21397 527 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 PHEXP78562 749 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 RUNX2Q13950 521 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 NR6A1Q15406 480 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 INAQ16352 499 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 MEP1AQ16819 746 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 TECRLQ5HYJ1 363 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 CHSY3Q70JA7 882 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 ZNF473Q8WTR7 871 aaKnown RBP15.08■□□□□ 0
ATG4B-201ENST00000344376 DCAKDQ8WVC6 231 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 REPS1Q96D71 796 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 QRFPRQ96P65 431 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 GPR78Q96P69 363 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 F2RL3Q96RI0 385 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 TBCDQ9BTW9 1192 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 MS4A8Q9BY19 250 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 L2HGDHQ9H9P8 463 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 PRTFDC1Q9NRG1 225 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 SPACA6W5XKT8 324 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 DOCK10Q96BY6 2186 aa15.08■□□□□ 0
ATG4B-201ENST00000344376 IGKV3D-11A0A0A0MRZ8 115 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 CLEC18AA5D8T8 446 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 SAGE2PA6NJ88 616 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 CTIFO43310 598 aaKnown RBP15.07■□□□□ 0
ATG4B-201ENST00000344376 SMIM24O75264 130 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 TBX6O95947 436 aaPredicted RBP15.07■□□□□ 0
ATG4B-201ENST00000344376 F10P00742 488 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 SNRPAP09012 282 aaKnown RBP15.07■□□□□ 0
ATG4B-201ENST00000344376 CERS1P27544 350 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 HSD17B7P56937 341 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 SLC13A2Q13183 592 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 MRPL49Q13405 166 aaKnown RBP15.07■□□□□ 0
ATG4B-201ENST00000344376 GTF2H2Q13888 395 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 PCBP2Q15366 365 aaKnown RBP eCLIP15.07■□□□□ 02e-6■■■□□ 17.5
ATG4B-201ENST00000344376 GLIPR1L2Q4G1C9 344 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 ACER2Q5QJU3 275 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 LIPJQ5W064 366 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 H3F3CQ6NXT2 135 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 GTF2H2CQ6P1K8 395 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 CLEC18BQ6UXF7 455 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 ZNF595Q8IYB9 648 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 FAM47BQ8NA70 645 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 CLEC18CQ8NCF0 446 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 OR7G3Q8NG95 312 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 CMTM7Q96FZ5 175 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 PCDHGA11Q9Y5H2 935 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 FLNBO75369 2602 aaKnown RBP15.07■□□□□ 0
ATG4B-201ENST00000344376 UGDHO60701 494 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 AGFG2O95081 481 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 ARL1P40616 181 aaPredicted RBP15.07■□□□□ 0
ATG4B-201ENST00000344376 LIM2P55344 173 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 DDX39BQ13838 428 aaKnown RBP15.07■□□□□ 0
ATG4B-201ENST00000344376 AP5B1Q2VPB7 878 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 FCRLBQ6BAA4 426 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 CNPY4Q8N129 248 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 LGI4Q8N135 537 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 BEST3Q8N1M1 668 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 PLD6Q8N2A8 252 aaKnown RBP15.07■□□□□ 0
ATG4B-201ENST00000344376 BCORP1Q8N888 145 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 PTGR2Q8N8N7 351 aaPredicted RBP15.07■□□□□ 0
ATG4B-201ENST00000344376 GRHL3Q8TE85 626 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 MTBPQ96DY7 904 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 BARD1Q99728 777 aaKnown RBP15.07■□□□□ 0
ATG4B-201ENST00000344376 IPPKQ9H8X2 491 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 LYRM4Q9HD34 91 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 NECTIN3Q9NQS3 549 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 XPR1Q9UBH6 696 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 DAPP1Q9UN19 280 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 NTNG1Q9Y2I2 539 aa15.07■□□□□ 0
ATG4B-201ENST00000344376 FLNCQ14315 2725 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 ANKUB1A6NFN9 424 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 RIPK2O43353 540 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 PRAMEF2O60811 474 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 CBX6O95503 412 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 TGFB1P01137 390 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 PIK3CBP42338 1070 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 SSR2P43308 183 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 RAP1GDS1P52306 607 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 TERF2Q15554 542 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 KHDRBS2Q5VWX1 349 aaKnown RBP15.06■□□□□ 0
ATG4B-201ENST00000344376 GOLGA7Q7Z5G4 137 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 CRLF3Q8IUI8 442 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 SCUBE1Q8IWY4 988 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 AMER2Q8N7J2 671 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 ST6GALNAC3Q8NDV1 305 aa15.06■□□□□ 0
ATG4B-201ENST00000344376 PRR7Q8TB68 274 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms