RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 OCA2Q04671 838 aa14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 DPTQ07507 201 aa14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 FCHO2Q0JRZ9 810 aa14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 RPS26P11Q5JNZ5 115 aaPredicted RBP14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 TNFAIP8L2Q6P589 184 aaPredicted RBP14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 RTL10Q7L3V2 364 aa14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 GET4Q7L5D6 327 aaPredicted RBP14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 PDZD3Q86UT5 571 aa14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 P3H2Q8IVL5 708 aa14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 LGI4Q8N135 537 aa14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 OXR1Q8N573 874 aa14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 GOT1L1Q8NHS2 421 aaPredicted RBP14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 LZICQ8WZA0 190 aa14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 LINC00615Q96LM1 132 aaPredicted RBP14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 NIPSNAP1Q9BPW8 284 aa14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 C1GALT1Q9NS00 363 aa14.23□□□□□ -0.13
VIPAS39-202ENST00000343765 PRAMEF33A0A0G2JMD5 474 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 A0A0G2JN53 185 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 C17orf113A0A1B0GUU1 675 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PLPP1O14494 284 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 LATO43561 262 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PRAMEF10O60809 474 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 TPP2P29144 1249 aaPredicted RBP14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 CYP2A13Q16696 494 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PROX2Q3B8N5 592 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 ADPRMQ3LIE5 342 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 SLCO6A1Q86UG4 719 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 C17orf64Q86WR6 236 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PLD3Q8IV08 490 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 KRT78Q8N1N4 520 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 UTP15Q8TED0 518 aaKnown RBP14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 TMEM245Q9H330 911 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 CXorf36Q9H7Y0 433 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 ACOT13Q9NPJ3 140 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PRDM8Q9NQV8 689 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 GPR34Q9UPC5 381 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 DOCK9Q9BZ29 2069 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 ANKDD1BA6NHY2 528 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 GRXCR1A8MXD5 290 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 VEGFDO43915 354 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PCDH8O95206 1070 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 STATHP02808 62 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 RB1P06400 928 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 KELP23276 732 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PTX3P26022 381 aaPredicted RBP14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 TGFBR1P36897 503 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PIK3CBP42338 1070 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 NCS1P62166 190 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 LRRC74AQ0VAA2 488 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 BTLAQ7Z6A9 289 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 SLC9B2Q86UD5 537 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 P2RY8Q86VZ1 359 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 DCUN1D3Q8IWE4 304 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 TMCO5AQ8N6Q1 288 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PROX1Q92786 737 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 RPL3LQ92901 407 aaKnown RBP14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 GTPBP3Q969Y2 492 aaKnown RBP14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 ASB16Q96NS5 453 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 ZNF300Q96RE9 604 aaPredicted RBP14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PITX2Q99697 317 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 OR1A2Q9Y585 309 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PCDHGB1Q9Y5G3 927 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 NUMA1Q14980 2115 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PRR23AA6NEV1 266 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 H7BY64 318 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 SH3BP5O60239 455 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 SERPIND1P05546 499 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 ST13P50502 369 aaKnown RBP14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 MAPK12P53778 367 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 CXCR4P61073 352 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 ADGRF3Q8IZF5 1079 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 ANKRD53Q8N9V6 530 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 KLK6Q92876 244 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 FGF13Q92913 245 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 UBE2E3Q969T4 207 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 PRAP1Q96NZ9 151 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 ARMC7Q9H6L4 198 aa14.22□□□□□ -0.13
VIPAS39-202ENST00000343765 M0R3G1 203 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 GABARAPO95166 117 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 C21orf33P30042 268 aaPredicted RBP14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 RPL3P39023 403 aaKnown RBP14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 HSPB3Q12988 150 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 ITGADQ13349 1161 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 TMEM52BQ4KMG9 183 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 TMEM236Q5W0B7 351 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 UNC5DQ6UXZ4 953 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 ADCK2Q7Z695 626 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 FAM129CQ86XR2 697 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 HRASLS5Q96KN8 279 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 GABARAPL3Q9BY60 117 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 OSGEPL1Q9H4B0 414 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 SLAMF7Q9NQ25 335 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 KIAA1549LQ6ZVL6 1849 aa14.21□□□□□ -0.13
VIPAS39-202ENST00000343765 C1QTNF3-AMACRE9PGA6 284 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 PCDH17O14917 1159 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 TBX6O95947 436 aaPredicted RBP14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 CDK3Q00526 305 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 MVKQ03426 396 aa14.21□□□□□ -0.14
VIPAS39-202ENST00000343765 FADDQ13158 208 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms