RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 MS4A12Q9NXJ0 267 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 CD274Q9NZQ7 290 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 MLXQ9UH92 298 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF112Q9UJU3 913 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 PLCL2Q9UPR0 1127 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 ZFR2Q9UPR6 939 aaKnown RBP7.82□□□□□ -1.16
ATG4A-201ENST00000343524 GSTK1Q9Y2Q3 226 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 NUBP2Q9Y5Y2 271 aa7.82□□□□□ -1.16
ATG4A-201ENST00000343524 LCHNA4D1U4 455 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 OR6C65A6NJZ3 312 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 LACTBL1A8MY62 500 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 ISM1B1AKI9 464 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 AIPO00170 330 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 SLC28A1O00337 649 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 PRKYO43930 277 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 TPST2O60704 377 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 PSIP1O75475 530 aaKnown RBP7.81□□□□□ -1.16
ATG4A-201ENST00000343524 VIPP01282 170 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 SMIM6P0DI80 62 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 SLURP2P0DP57 97 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 FOSL2P15408 326 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 EPHA2P29317 976 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 SLC6A1P30531 599 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 LCN1P31025 176 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 MMP12P39900 470 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 RPL35P42766 123 aaKnown RBP7.81□□□□□ -1.16
ATG4A-201ENST00000343524 CRYBB2P43320 205 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 MAN2A2P49641 1150 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 GZMMP51124 257 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 NUDT6P53370 316 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 PSMD4P55036 377 aaKnown RBP7.81□□□□□ -1.16
ATG4A-201ENST00000343524 IL18Q14116 193 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 SPHARQ15513 63 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 TARBP2Q15633 366 aaKnown RBP7.81□□□□□ -1.16
ATG4A-201ENST00000343524 TUSC1Q2TAM9 212 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 AP5B1Q2VPB7 878 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 SPIN4Q56A73 249 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 CDKL4Q5MAI5 379 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 CELF3Q5SZQ8 465 aaKnown RBP7.81□□□□□ -1.16
ATG4A-201ENST00000343524 SYPL2Q5VXT5 272 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 IL27RAQ6UWB1 636 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 FAM198BQ6UWH4 519 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 TMEM207Q6UWW9 146 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 CBLL1Q75N03 491 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 RAB11FIP2Q7L804 512 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 CHMP1BQ7LBR1 199 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 ACOT1Q86TX2 421 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 IL17RCQ8NAC3 791 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 OR8D4Q8NGM9 314 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 GPR150Q8NGU9 434 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 ADAMTS19Q8TE59 1207 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 SGK3Q96BR1 496 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 KCNC2Q96PR1 638 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 SLC38A2Q96QD8 506 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 BARD1Q99728 777 aaKnown RBP7.81□□□□□ -1.16
ATG4A-201ENST00000343524 CCM2Q9BSQ5 444 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 DPAGT1Q9H3H5 408 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 CLMPQ9H6B4 373 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 PPP1R3EQ9H7J1 279 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 COA4Q9NYJ1 87 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 SLC25A37Q9NYZ2 338 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 MKL2Q9ULH7 1088 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 PADI2Q9Y2J8 665 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 PCDHGA2Q9Y5H1 932 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 MYLKQ15746 1914 aa7.81□□□□□ -1.16
ATG4A-201ENST00000343524 MEIKINA0A087WXM9 373 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 A0A0B4J203 849 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 MMP20O60882 483 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 AP2A2O94973 939 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 RASGRP1O95267 797 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 GLP2RO95838 553 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 ADRB1P08588 477 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 FGF2P09038 288 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 CD96P40200 585 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 CLCN4P51793 760 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 OSTNP61366 133 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 JAG1P78504 1218 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 CYP4F8P98187 520 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 SP4Q02446 784 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 LAMTOR4Q0VGL1 99 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 PCBP1Q15365 356 aaKnown RBP eCLIP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 CYP27C1Q4G0S4 372 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 CCDC157Q569K6 752 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF789Q5FWF6 425 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 PABPC1L2AQ5JQF8 200 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 NHLRC3Q5JS37 347 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 CNIH2Q6PI25 160 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 AFTPHQ6ULP2 937 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 FIP1L1Q6UN15 594 aaKnown RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 RANBP10Q6VN20 620 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF730Q6ZMV8 503 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 Q6ZSR9 355 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 RNF180Q86T96 592 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 PIM3Q86V86 326 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 MIB1Q86YT6 1006 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 MSRB3Q8IXL7 192 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 UBE2J2Q8N2K1 259 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 NPWQ8N729 165 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 RNF149Q8NC42 400 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 PROKR2Q8NFJ6 384 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms