RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 RAET1LQ5VY80 246 aa14.46□□□□□ -0.1
UBE3B-202ENST00000342494 CCSAPQ6IQ19 270 aaPredicted RBP14.46□□□□□ -0.1
UBE3B-202ENST00000342494 FAM72DQ6L9T8 149 aa14.46□□□□□ -0.1
UBE3B-202ENST00000342494 FAM72BQ86X60 149 aa14.46□□□□□ -0.1
UBE3B-202ENST00000342494 OR5L2Q8NGL0 311 aa14.46□□□□□ -0.1
UBE3B-202ENST00000342494 VRTNQ9H8Y1 702 aa14.46□□□□□ -0.1
UBE3B-202ENST00000342494 MEAF6Q9HAF1 191 aa14.46□□□□□ -0.1
UBE3B-202ENST00000342494 EBF2Q9HAK2 575 aa14.46□□□□□ -0.1
UBE3B-202ENST00000342494 PTNP21246 168 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 AGTR2P50052 363 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 NNATQ16517 81 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 SCGB2B2Q4G0G5 96 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 ZNF678Q5SXM1 525 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 LDLRAD1Q5T700 205 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 ZNF100Q8IYN0 542 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 SLC22A8Q8TCC7 542 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 H3BQ06 376 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-202ENST00000342494 OR7A10O76100 309 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 SOX14O95416 240 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 OTX2P32243 289 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 GLP1RP43220 463 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 RPS3AP61247 264 aaKnown RBP14.45□□□□□ -0.1
UBE3B-202ENST00000342494 RPS15AP62244 130 aaKnown RBP14.45□□□□□ -0.1
UBE3B-202ENST00000342494 SLAMF1Q13291 335 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 NPTX1Q15818 432 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 C1orf189Q5VU69 101 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 ZNF782Q6ZMW2 699 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-202ENST00000342494 CCDC115Q96NT0 180 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 CDCA3Q99618 268 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-202ENST00000342494 TMED9Q9BVK6 235 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 SLC17A9Q9BYT1 436 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 GPX6P59796 221 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 PPP1R8Q12972 351 aaKnown RBP14.45□□□□□ -0.1
UBE3B-202ENST00000342494 GPRIN1Q7Z2K8 1008 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 GLIS1Q8NBF1 620 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 CD320Q9NPF0 282 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 GOLGA4Q13439 2230 aaKnown RBP14.45□□□□□ -0.1
UBE3B-202ENST00000342494 ENTPD6O75354 484 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 DIRAS1O95057 198 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 ITGB1P05556 798 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 CHRM1P11229 460 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-202ENST00000342494 CKMT2P17540 419 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 FPR1P21462 350 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 RPL19P84098 196 aaKnown RBP14.45□□□□□ -0.1
UBE3B-202ENST00000342494 HHEXQ03014 270 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 ECH1Q13011 328 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 SGCAQ16586 387 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 CYBRD1Q53TN4 286 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 MSANTD1Q6ZTZ1 278 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 UBQLNLQ8IYU4 475 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 OR9I1Q8NGQ6 314 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 BBS10Q8TAM1 723 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 RAB2BQ8WUD1 216 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 MND1Q9BWT6 205 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 MYO5BQ9ULV0 1848 aa14.45□□□□□ -0.1
UBE3B-202ENST00000342494 MYOCOSA0A1B0GUC4 107 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 C2orf92A0A1B0GVN3 265 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 ZNF487B1APH4 448 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 CDC40O60508 579 aaKnown RBP eCLIP14.44□□□□□ -0.1
UBE3B-202ENST00000342494 CD9P21926 228 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 OR2B6P58173 313 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 SLC35G1Q2M3R5 365 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 MSS51Q4VC12 460 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 SLC35F1Q5T1Q4 408 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 PLCZ1Q86YW0 608 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 OR5P2Q8WZ92 322 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 IL17FQ96PD4 163 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 METTL8Q9H825 291 aaKnown RBP14.44□□□□□ -0.1
UBE3B-202ENST00000342494 HHATLQ9HCP6 504 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 ENY2Q9NPA8 101 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 NUAK1O60285 661 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 RABIFP47224 123 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 ENTPD1P49961 510 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 ROR2Q01974 943 aaKnown RBP14.44□□□□□ -0.1
UBE3B-202ENST00000342494 ZNF227Q86WZ6 799 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 GALNT12Q8IXK2 581 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 CEP76Q8TAP6 659 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 C15orf40Q8WUR7 153 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 OSTF1Q92882 214 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 CHIAQ9BZP6 476 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 CLDN25C9JDP6 229 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 ZNF16P17020 682 aaPredicted RBP14.44□□□□□ -0.1
UBE3B-202ENST00000342494 NUDT6P53370 316 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 DCDC1P59894 354 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 NTHL1P78549 312 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 LIN52Q52LA3 116 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 C17orf99Q6UX52 265 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 TAS1R3Q7RTX0 852 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 OR6N2Q8NGY6 317 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 FANK1Q8TC84 345 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 TMEM74Q96NL1 305 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 XYLT2Q9H1B5 865 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 RHCGQ9UBD6 479 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 ACOX3O15254 700 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 TBPL1P62380 186 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 FRMD7Q6ZUT3 714 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 NUP43Q8NFH3 380 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 ZDHHC1Q8WTX9 485 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 ABLIM1O14639 778 aa14.44□□□□□ -0.1
UBE3B-202ENST00000342494 IL3P08700 152 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms