RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 PGRMC2O15173 223 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 CDRT1O95170 752 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 RB1P06400 928 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 ITPKBP27987 946 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 CCR7P32248 378 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 SHMT2P34897 504 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 IFNGR2P38484 337 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 MVKQ03426 396 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 LASP1Q14847 261 aaKnown RBP13□□□□□ -0.33
TMEM248-201ENST00000341567 SMN1Q16637 294 aaKnown RBP13□□□□□ -0.33
TMEM248-201ENST00000341567 SLC36A3Q495N2 470 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 CATSPEREQ5SY80 951 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 TMEM207Q6UWW9 146 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 ERN2Q76MJ5 926 aaKnown RBP13□□□□□ -0.33
TMEM248-201ENST00000341567 DNAJA3Q96EY1 480 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 TBX5Q99593 518 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 ARNT2Q9HBZ2 717 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 E7EQ34 232 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 STX11O75558 287 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 DHFRP00374 187 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 SAGP10523 405 aaPredicted RBP13□□□□□ -0.33
TMEM248-201ENST00000341567 ANXA8P13928 327 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 GSTM2P28161 218 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 DCTP40126 519 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 PXNP49023 591 aaPredicted RBP13□□□□□ -0.33
TMEM248-201ENST00000341567 AKR1D1P51857 326 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 TBPL1P62380 186 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 BHLHB9Q6PI77 547 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 CEACAM20Q6UY09 585 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 PLEKHG7Q6ZR37 379 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 LRRC70Q7Z2Q7 622 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 MINDY2Q8NBR6 621 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 SH3YL1Q96HL8 342 aaPredicted RBP13□□□□□ -0.33
TMEM248-201ENST00000341567 FCRL4Q96PJ5 515 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 TEFMQ96QE5 360 aaKnown RBP13□□□□□ -0.33
TMEM248-201ENST00000341567 SLC30A2Q9BRI3 323 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 EFCAB11Q9BUY7 163 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 C3orf14Q9HBI5 128 aa13□□□□□ -0.33
TMEM248-201ENST00000341567 PAQR5Q9NXK6 330 aaPredicted RBP13□□□□□ -0.33
TMEM248-201ENST00000341567 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.99□□□□□ -0.33
TMEM248-201ENST00000341567 M0R129 80 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 EEDO75530 441 aaKnown RBP12.99□□□□□ -0.33
TMEM248-201ENST00000341567 OR5F1O95221 314 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 LCN1P1Q5VSP4 162 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 HACD2Q6Y1H2 254 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 ZNF730Q6ZMV8 503 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 RNF130Q86XS8 419 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 TBC1D15Q8TC07 691 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 PMEPA1Q969W9 287 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 DSN1Q9H410 356 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 PRDM8Q9NQV8 689 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 SPATA7Q9P0W8 599 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 RIMKLBQ9ULI2 386 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 MAPRE3Q9UPY8 281 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 RWDD3Q9Y3V2 267 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 CLCA3PQ9Y6N3 262 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 SHROOM3Q8TF72 1996 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 A8MUA0 341 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 TSPAN4O14817 238 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 PDPK1O15530 556 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 NOS1APO75052 506 aaPredicted RBP12.99□□□□□ -0.33
TMEM248-201ENST00000341567 SLC35G6P0C7Q6 338 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 HMGA1P17096 107 aaKnown RBP12.99□□□□□ -0.33
TMEM248-201ENST00000341567 CAPZA2P47755 286 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 FCHO2Q0JRZ9 810 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 GRSF1Q12849 480 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMEM248-201ENST00000341567 LHX8Q68G74 356 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 ZFAND4Q86XD8 727 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 OR9A1PQ8NGU1 263 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 ZNF514Q96K75 400 aaPredicted RBP12.99□□□□□ -0.33
TMEM248-201ENST00000341567 ATOH8Q96SQ7 321 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 MED28Q9H204 178 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 TMEM138Q9NPI0 162 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 SPEF1Q9Y4P9 236 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 OR52A4PA6NMU1 304 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 CDC123O75794 336 aaPredicted RBP12.99□□□□□ -0.33
TMEM248-201ENST00000341567 CH25HO95992 272 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 BMP7P18075 431 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 CD247P20963 164 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 CMPK1P30085 196 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 CSTF2P33240 577 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMEM248-201ENST00000341567 RORCP51449 518 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 SCARB2Q14108 478 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 MRPL43Q8N983 215 aaKnown RBP12.99□□□□□ -0.33
TMEM248-201ENST00000341567 AQP11Q8NBQ7 271 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 SLC5A11Q8WWX8 675 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 ANKRA2Q9H9E1 313 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 LTBP1Q14766 1721 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 PRAMEF33A0A0G2JMD5 474 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 A0A1W2PQU0 124 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 PRAMEF10O60809 474 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 FUCA1P04066 466 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 CPN2P22792 545 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 CCR8P51685 355 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 CHMP1BQ7LBR1 199 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 IQCHQ86VS3 1027 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 ZNF675Q8TD23 568 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 PIGKQ92643 395 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 SLC38A4Q969I6 547 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 P2RY13Q9BPV8 354 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms