RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 DLX3O60479 287 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 TNFSF13O75888 250 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 LSM8O95777 96 aaKnown RBP10.09□□□□□ -0.79
ATXN3-201ENST00000340660 KRT3P12035 628 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 XCR1P46094 333 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 MPP1Q00013 466 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 GGTLC2Q14390 218 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 BECN1Q14457 450 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 SF1Q15637 639 aaKnown RBP10.09□□□□□ -0.79
ATXN3-201ENST00000340660 PPP6R3Q5H9R7 873 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-201ENST00000340660 KCTD11Q693B1 232 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 TRIM65Q6PJ69 517 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 IL20RBQ6UXL0 311 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 USP43Q70EL4 1123 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 CENPQQ7L2Z9 268 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-201ENST00000340660 GCNT2Q8N0V5 402 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 RASGEF1CQ8N431 466 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 HTRA1Q92743 480 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 C11orf24Q96F05 449 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-201ENST00000340660 WWC2-AS2Q96NR7 200 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 CSPG4P5Q96PW8 444 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 PEBP4Q96S96 227 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 ACKR4Q9NPB9 350 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 RBM22Q9NW64 420 aaKnown RBP eCLIP10.09□□□□□ -0.79
ATXN3-201ENST00000340660 POLG2Q9UHN1 485 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 DNAJC12Q9UKB3 198 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 CAMK2AQ9UQM7 478 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 B3GALT5Q9Y2C3 310 aa10.09□□□□□ -0.79
ATXN3-201ENST00000340660 LYSTQ99698 3801 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 GLYATL1P3A0A0U1RQE8 302 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 A0A0U1RQJ8 604 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 A0A1W2PP18 115 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 SMAD9O15198 467 aaKnown RBP10.08□□□□□ -0.8
ATXN3-201ENST00000340660 RCBTB2O95199 551 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 TSPAN15O95858 294 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 APEHP13798 732 aaKnown RBP10.08□□□□□ -0.8
ATXN3-201ENST00000340660 ACADLP28330 430 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 ZNF143P52747 638 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-201ENST00000340660 IRX1P78414 480 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-201ENST00000340660 DUSP8Q13202 625 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 LCE4AQ5TA78 99 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 RESP18Q5W5W9 173 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 RINLQ6ZS11 566 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 FAM47EQ6ZV65 393 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 GPSM1Q86YR5 675 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 PM20D2Q8IYS1 436 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 CSNK1A1LQ8N752 337 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 PLPP5Q8NEB5 264 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 NFAM1Q8NET5 270 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-201ENST00000340660 OR9A4Q8NGU2 314 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 OR51Q1Q8NH59 317 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 OR5K2Q8NHB8 316 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 FAM71BQ8TC56 605 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 MAML1Q92585 1016 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 CRACR2AQ9BSW2 395 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 AARSD1Q9BTE6 412 aaKnown RBP10.08□□□□□ -0.8
ATXN3-201ENST00000340660 SNRNP25Q9BV90 132 aaKnown RBP10.08□□□□□ -0.8
ATXN3-201ENST00000340660 PDP1Q9P0J1 537 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-201ENST00000340660 HCN3Q9P1Z3 774 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 CIDEBQ9UHD4 219 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 SMC3Q9UQE7 1217 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 DTX4Q9Y2E6 619 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 KLK4Q9Y5K2 254 aa10.08□□□□□ -0.8
ATXN3-201ENST00000340660 DNAH9Q9NYC9 4486 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 TRBV11-1A0A0K0K1C0 115 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 PABPN1LA6NDY0 278 aaKnown RBP10.07□□□□□ -0.8
ATXN3-201ENST00000340660 C16orf97H3BN30 126 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 B4GALT2O60909 372 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 CDC123O75794 336 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-201ENST00000340660 FTCDO95954 541 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 MYL1P05976 194 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 SLC9A1P19634 815 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 PSMB5P28074 263 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 HMGCLP35914 325 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 RPA4Q13156 261 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 ITGA9Q13797 1035 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 MAN2A1Q16706 1144 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 BEAN1Q3B7T3 259 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 XKR6Q5GH73 641 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 TMEM201Q5SNT2 666 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 SYDE1Q6ZW31 735 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-201ENST00000340660 PRSS41Q7RTY9 318 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 PCGF5Q86SE9 256 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 GPALPP1Q8IXQ4 340 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 CAVIN3Q969G5 261 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 SLC22A18Q96BI1 424 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 C3orf49Q96BT1 292 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 IL17FQ96PD4 163 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 TSG101Q99816 390 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 ESM1Q9NQ30 184 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 ATG4BQ9Y4P1 393 aa10.07□□□□□ -0.8
ATXN3-201ENST00000340660 IGHV4-61A0A0C4DH41 118 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 SAGE2PA6NJ88 616 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 MAGEB17A8MXT2 336 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 VWC2LB2RUY7 222 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 PES1O00541 588 aaKnown RBP10.06□□□□□ -0.8
ATXN3-201ENST00000340660 AP2A1O95782 977 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 KRT1P04264 644 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 POU2F1P14859 743 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 SOX3P41225 446 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms