RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ZC4H2Q9NQZ6 224 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 MTMR10Q9NXD2 777 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 CLIC1O00299 241 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 KLC1Q07866 573 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 ARHGAP19Q14CB8 494 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 RASGEF1AQ8N9B8 481 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 ZNF382Q96SR6 550 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 SEC61A2Q9H9S3 476 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 IL1RAPQ9NPH3 570 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 LOC285095A0A1B0GVY8 99 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 DNAJA2O60884 412 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 UBTFL6P0CB48 400 aaPredicted RBP12.28□□□□□ -0.44
LIN54-201ENST00000340417 TIA1P31483 386 aaKnown RBP eCLIP12.28□□□□□ -0.44
LIN54-201ENST00000340417 IDH3AP50213 366 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 PTGES3Q15185 160 aaKnown RBP12.28□□□□□ -0.44
LIN54-201ENST00000340417 DDHD1Q8NEL9 900 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 IFT27Q9BW83 186 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 PLEKHA1Q9HB21 404 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 MED31Q9Y3C7 131 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 C17orf105B2RV13 164 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 AP1G1O43747 822 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 DRD2P14416 443 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 SOX6P35712 828 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 OR1D4P47884 311 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 GFOD2Q3B7J2 385 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 PTCHD4Q6ZW05 846 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 OR1E3Q8WZA6 343 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 LRMDAQ9H2I8 198 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 ATXN7L1Q9ULK2 861 aaPredicted RBP12.28□□□□□ -0.44
LIN54-201ENST00000340417 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.28□□□□□ -0.44
LIN54-201ENST00000340417 SNX11Q9Y5W9 270 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 RGPD3A6NKT7 1758 aaPredicted RBP12.28□□□□□ -0.44
LIN54-201ENST00000340417 SRPX2O60687 465 aaPredicted RBP12.28□□□□□ -0.44
LIN54-201ENST00000340417 UGT2B7P16662 529 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 FOXN2P32314 431 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 RAB15P59190 212 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 PCDH1Q08174 1060 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 GPR18Q14330 331 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 SNAPC1Q16533 368 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 ETFBKMTQ8IXQ9 262 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 ARFGAP1Q8N6T3 406 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 CD180Q99467 661 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 GPER1Q99527 375 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 ZDHHC18Q9NUE0 388 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 FAM120CQ9NX05 1096 aaKnown RBP12.28□□□□□ -0.44
LIN54-201ENST00000340417 NAALAD2Q9Y3Q0 740 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 LAMA4Q16363 1823 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 TLCD2A6NGC4 264 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 FADS2P1A8MWK0 482 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 SCELO95171 688 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 AVPR2P30518 371 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 OR2B6P58173 313 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 MTPNP58546 118 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 SMARCD3Q6STE5 483 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 TMEM107Q6UX40 140 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 NANOGNBQ7Z5D8 188 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 RCBTB1Q8NDN9 531 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 OR4K1Q8NGD4 311 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 EFHD2Q96C19 240 aaPredicted RBP12.27□□□□□ -0.44
LIN54-201ENST00000340417 TMEM109Q9BVC6 243 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 PCED1AQ9H1Q7 454 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 LRRN3Q9H3W5 708 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 LOXL2Q9Y4K0 774 aa12.27□□□□□ -0.44
LIN54-201ENST00000340417 IGLV3-10A0A075B6K4 115 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 SMIM31A0A1B0GVY4 71 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 PLRG1O43660 514 aaKnown RBP12.27□□□□□ -0.45
LIN54-201ENST00000340417 PPP2CBP62714 309 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 PPP2CAP67775 309 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 SYT16Q17RD7 645 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 IKBIPQ70UQ0 350 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 RNASE11Q8TAA1 199 aaKnown RBP12.27□□□□□ -0.45
LIN54-201ENST00000340417 OLFM1Q99784 485 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 GPATCH1Q9BRR8 931 aaKnown RBP12.27□□□□□ -0.45
LIN54-201ENST00000340417 VN1R3Q9BXE9 311 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 TRIM2Q9C040 744 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 NXT1Q9UKK6 140 aaKnown RBP12.27□□□□□ -0.45
LIN54-201ENST00000340417 GON4LQ3T8J9 2241 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 PRRC2BQ5JSZ5 2229 aaKnown RBP12.27□□□□□ -0.45
LIN54-201ENST00000340417 C2orf92A0A1B0GVN3 265 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 EMC8O43402 210 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 CSTAP01040 98 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 HOXC8P31273 242 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 CDH12P55289 794 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 NLGN4YQ8NFZ3 816 aaPredicted RBP12.27□□□□□ -0.45
LIN54-201ENST00000340417 ZFPM2Q8WW38 1151 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 ZUFSPQ96AP4 578 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 ALG2Q9H553 416 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 DCLRE1BQ9H816 532 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 PRPF19Q9UMS4 504 aaKnown RBP12.27□□□□□ -0.45
LIN54-201ENST00000340417 TRBV11-1A0A0K0K1C0 115 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 C17orf113A0A1B0GUU1 675 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 PTGES3LE9PB15 166 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 HCN1O60741 890 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 PRAMEF2O60811 474 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 NR0B1P51843 470 aaKnown RBP12.27□□□□□ -0.45
LIN54-201ENST00000340417 LARP4Q71RC2 724 aaKnown RBP eCLIP12.27□□□□□ -0.45
LIN54-201ENST00000340417 CADM4Q8NFZ8 388 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 OR5P2Q8WZ92 322 aa12.27□□□□□ -0.45
LIN54-201ENST00000340417 RBM7Q9Y580 266 aaKnown RBP12.27□□□□□ -0.45
LIN54-201ENST00000340417 TRIM3O75382 744 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms