RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 NLNQ9BYT8 704 aa9.28□□□□□ -0.92
SYN3-201ENST00000332840 KLHL25Q9H0H3 589 aa9.28□□□□□ -0.92
SYN3-201ENST00000332840 ACTL8Q9H568 366 aa9.28□□□□□ -0.92
SYN3-201ENST00000332840 ENAMQ9NRM1 1142 aa9.28□□□□□ -0.92
SYN3-201ENST00000332840 GEMIN8Q9NWZ8 242 aaKnown RBP9.28□□□□□ -0.92
SYN3-201ENST00000332840 ZNF490Q9ULM2 529 aaPredicted RBP9.28□□□□□ -0.92
SYN3-201ENST00000332840 POLHQ9Y253 713 aa9.28□□□□□ -0.92
SYN3-201ENST00000332840 DYRK1BQ9Y463 629 aa9.28□□□□□ -0.92
SYN3-201ENST00000332840 SPTAN1Q13813 2472 aaKnown RBP9.27□□□□□ -0.93
SYN3-201ENST00000332840 KCNE1BA0A087WTH5 132 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 KRT87PA6NCN2 255 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 B8ZZF3 427 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 E7ENX8 843 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 GSC2O15499 205 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 NKX2-8O15522 239 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 ZNF749O43361 778 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 SRPX2O60687 465 aaPredicted RBP9.27□□□□□ -0.93
SYN3-201ENST00000332840 WFS1O76024 890 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 ALDOCP09972 364 aaKnown RBP9.27□□□□□ -0.93
SYN3-201ENST00000332840 PRKAR1AP10644 381 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 PCSK2P16519 638 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 PEBP1P30086 187 aaKnown RBP9.27□□□□□ -0.93
SYN3-201ENST00000332840 TBPL1P62380 186 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 ABATP80404 500 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 TAP2Q03519 686 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 EMX2Q04743 252 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 CUL3Q13618 768 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 FASTKQ14296 549 aaKnown RBP9.27□□□□□ -0.93
SYN3-201ENST00000332840 GRM7Q14831 915 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 ABRAXAS2Q15018 415 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 NCF4Q15080 339 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 CPSF6Q16630 551 aaKnown RBP eCLIP9.27□□□□□ -0.93
SYN3-201ENST00000332840 AGKQ53H12 422 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 XKR6Q5GH73 641 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 FAM219BQ5XKK7 198 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 GRHL2Q6ISB3 625 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 FIGLAQ6QHK4 219 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 LCTLQ6UWM7 567 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 SNX32Q86XE0 403 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 LRRC56Q8IYG6 542 aaPredicted RBP9.27□□□□□ -0.93
SYN3-201ENST00000332840 MIER2Q8N344 545 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 DNAJC22Q8N4W6 341 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 TTC29Q8NA56 475 aaPredicted RBP9.27□□□□□ -0.93
SYN3-201ENST00000332840 FNDC5Q8NAU1 212 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 PPFIBP2Q8ND30 876 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 RBM15BQ8NDT2 890 aaKnown RBP9.27□□□□□ -0.93
SYN3-201ENST00000332840 OR2L3Q8NG85 312 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 OR2T11Q8NH01 316 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 SELENOMQ8WWX9 145 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 MCUR1Q96AQ8 359 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 IP6K3Q96PC2 410 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 IL17FQ96PD4 163 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 OR4K3Q96R72 315 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 HAUS8Q9BT25 410 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 CADM1Q9BY67 442 aaKnown RBP9.27□□□□□ -0.93
SYN3-201ENST00000332840 PCBD2Q9H0N5 130 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 MMADHCQ9H3L0 296 aaPredicted RBP9.27□□□□□ -0.93
SYN3-201ENST00000332840 ELOVL6Q9H5J4 265 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 EFCAB1Q9HAE3 211 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 FAM60AQ9NP50 221 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 CCDC177Q9NQR7 707 aaPredicted RBP9.27□□□□□ -0.93
SYN3-201ENST00000332840 AIG1Q9NVV5 245 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 TMEM45AQ9NWC5 275 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 GIMAP2Q9UG22 337 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 CIDEBQ9UHD4 219 aa9.27□□□□□ -0.93
SYN3-201ENST00000332840 FARSAQ9Y285 508 aaKnown RBP9.27□□□□□ -0.93
SYN3-201ENST00000332840 LRRK2Q5S007 2527 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 TXNDC9O14530 226 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 LSM1O15116 133 aaKnown RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 PRICKLE3O43900 615 aaPredicted RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 PRAMEF4O60810 478 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 WISP1O95388 367 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 PDYNP01213 254 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 IGHEP01854 428 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 SNRPB2P08579 225 aaKnown RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 KRT16P08779 473 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 C1GALT1C1LP0DN25 315 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 PIM1P11309 404 aaPredicted RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 HSD3B1P14060 373 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 NPPBP16860 134 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 GPX3P22352 226 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 F8A1P23610 371 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 HRH2P25021 359 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 HSD3B2P26439 372 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 PGM1P36871 562 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 GABRA4P48169 554 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 POLE2P56282 527 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 CYP4F2P78329 520 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 DCDP81605 110 aaKnown RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 RELAQ04206 551 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 NFATC3Q12968 1075 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 CSTF3Q12996 717 aaKnown RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 KCNAB2Q13303 367 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 LAPTM5Q13571 262 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 TSTA3Q13630 321 aaPredicted RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 DOC2AQ14183 400 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 E2F2Q14209 437 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 ZIC1Q15915 447 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 HIST2H2ACQ16777 129 aaPredicted RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 UGT8Q16880 541 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms