RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 SPASTQ9UBP0 616 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 SAMHD1Q9Y3Z3 626 aaKnown RBP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 TRAV19A0A0A6YYK7 116 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 PRAMEF33A0A0G2JMD5 474 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 FAM95CA0A1B0GW59 222 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 LOC390937A0A1W2PQ73 354 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 UBA6A0AVT1 1052 aaPredicted RBP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 FAM234BA2RU67 622 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 ZNF670-ZNF695F2Z2N8 137 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 M0QZ92 97 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 GABRDO14764 452 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 GSTA4O15217 222 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 PRAMEF10O60809 474 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 DUSP11O75319 330 aaKnown RBP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 CBX7O95931 251 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 MT-CO1P00395 513 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 CFDP00746 253 aaPredicted RBP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 SERPINA1P01009 418 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 PTHP01270 115 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 FGF4P08620 206 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 TSPAN8P19075 237 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 PRKACGP22612 351 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 PTAFRP25105 342 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 HOXC8P31273 242 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 AVPR1AP37288 418 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 CD96P40200 585 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 ARL4AP40617 200 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 RFC3P40938 356 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 MAGEA2P43356 314 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 ZFP36L2P47974 494 aaKnown RBP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 GPR15P49685 360 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 VEGFCP49767 419 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 DAPP51397 102 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 GPR143P51810 404 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 NFKB2Q00653 900 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 TEAD4Q15561 434 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 MICBQ29980 383 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 EIF2S3LQ2VIR3 472 aaKnown RBP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 ZNF528Q3MIS6 628 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 TCTE1Q5JU00 501 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 C10orf62Q5T681 223 aaPredicted RBP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 CPZQ66K79 652 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 CLEC6AQ6EIG7 209 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 ALKBH2Q6NS38 261 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 GALNT5Q7Z7M9 940 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 ZNF655Q8N720 491 aaPredicted RBP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 FAM86B1Q8N7N1 296 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 CLDN22Q8N7P3 220 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 ZNF548Q8NEK5 533 aaPredicted RBP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 OR11H4Q8NGC9 324 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 TWIST2Q8WVJ9 160 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 GTF3AQ92664 365 aaKnown RBP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 ZBED6CLQ96FA7 236 aaPredicted RBP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 DIRAS2Q96HU8 199 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 ITCHQ96J02 903 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 COQ10AQ96MF6 247 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 NPY6RQ99463 290 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 ADAM2Q99965 735 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 OMDQ99983 421 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 SLC29A3Q9BZD2 475 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 NKX6-2Q9C056 277 aaPredicted RBP7.2□□□□□ -1.26
TRIM49-201ENST00000329758 SIK2Q9H0K1 926 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 DNTTIP1Q9H147 329 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 MIXL1Q9H2W2 232 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 AASSQ9UDR5 926 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 LIMD1Q9UGP4 676 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 CLCA3PQ9Y6N3 262 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 CDH10Q9Y6N8 788 aa7.2□□□□□ -1.26
TRIM49-201ENST00000329758 A0A096LPI6 279 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 A0A1B0GW55 424 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 FAM74A7A6NL05 159 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 ZNF729A6NN14 1252 aaPredicted RBP7.19□□□□□ -1.26
TRIM49-201ENST00000329758 HHLA1C9JL84 531 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 IFRD1O00458 451 aaPredicted RBP7.19□□□□□ -1.26
TRIM49-201ENST00000329758 PDCD5O14737 125 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 SCAMP3O14828 347 aaKnown RBP7.19□□□□□ -1.26
TRIM49-201ENST00000329758 PIP5K1BO14986 540 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 PCDHGA12O60330 932 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 PLOD3O60568 738 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 HPGDSO60760 199 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 EIF3GO75821 320 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRIM49-201ENST00000329758 DHFRP00374 187 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 PRR35P0CG20 571 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 DUX4L2P0CJ85 424 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 DUX4L3P0CJ86 424 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 DUX4L4P0CJ87 422 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 DUX4L5P0CJ88 424 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 DUX4L6P0CJ89 424 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 DUX4L7P0CJ90 424 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 SLC2A2P11168 524 aaPredicted RBP7.19□□□□□ -1.26
TRIM49-201ENST00000329758 ZNF37AP17032 561 aaPredicted RBP7.19□□□□□ -1.26
TRIM49-201ENST00000329758 TPH1P17752 444 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 ERCC2P18074 760 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 FPR1P21462 350 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 DNASE1P24855 282 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 C21orf33P30042 268 aaPredicted RBP7.19□□□□□ -1.26
TRIM49-201ENST00000329758 HOXA9P31269 272 aa7.19□□□□□ -1.26
TRIM49-201ENST00000329758 ATP5C1P36542 298 aaKnown RBP7.19□□□□□ -1.26
TRIM49-201ENST00000329758 SPAM1P38567 509 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms