RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 PSMA3P25788 255 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 CTNNB1P35222 781 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 XKP51811 444 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 TAS2R39P59534 338 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 KIAA1024LP59773 190 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 CHAF1BQ13112 559 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 ERV3-1Q14264 604 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 PCID2Q5JVF3 399 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 CELF3Q5SZQ8 465 aaKnown RBP11.39□□□□□ -0.59
SHMT2-201ENST00000328923 LUZP2Q86TE4 346 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 CHPFQ8IZ52 775 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 KRT78Q8N1N4 520 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 OR10Q1Q8NGQ4 319 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 PHOSPHO1Q8TCT1 267 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 ADAMTS19Q8TE59 1207 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 GGHQ92820 318 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 PEX11GQ96HA9 241 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 PPM1MQ96MI6 270 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 GPR20Q99678 358 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 SARGQ9BW04 601 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 DNTTIP1Q9H147 329 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 ANKRD19PQ9H560 264 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 MED9Q9NWA0 146 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 SLC6A5Q9Y345 797 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 TOXO94900 526 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 C9P02748 559 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 COX5BP10606 129 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 CTPS1P17812 591 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 HOXA9P31269 272 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 ARSDP51689 593 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 FKBP1BP68106 108 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 NFKB2Q00653 900 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 LRRC32Q14392 662 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 TMEM132DQ14C87 1099 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 SLC14A2Q15849 920 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 KLHL26Q53HC5 615 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 TMEM107Q6UX40 140 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 FAM131BQ86XD5 332 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 FBXO16Q8IX29 292 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-201ENST00000328923 EFHBQ8N7U6 833 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 NETO2Q8NC67 525 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 C2CD4AQ8NCU7 369 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-201ENST00000328923 SLC38A2Q96QD8 506 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 GLOD4Q9HC38 313 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 B3GAT2Q9NPZ5 323 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 ERVW-1Q9UQF0 538 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 CDH10Q9Y6N8 788 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 DENND4AQ7Z401 1863 aa11.39□□□□□ -0.59
SHMT2-201ENST00000328923 ZSWIM8A7E2V4 1837 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 GLYATL1P3A0A0U1RQE8 302 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 ZNF729A6NN14 1252 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-201ENST00000328923 PIP5K1BO14986 540 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 B4GALT5O43286 388 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 LZTS3O60299 673 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-201ENST00000328923 GADD45GO95257 159 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 VIPP01282 170 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 FGF4P08620 206 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 LTA4HP09960 611 aaKnown RBP11.38□□□□□ -0.59
SHMT2-201ENST00000328923 HGFP14210 728 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 DNASE1P24855 282 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 STOMP27105 288 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 ACTR1BP42025 376 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 ATP12AP54707 1039 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 SNTB1Q13884 538 aaKnown RBP11.38□□□□□ -0.59
SHMT2-201ENST00000328923 PUM1Q14671 1186 aaKnown RBP eCLIP11.38□□□□□ -0.59
SHMT2-201ENST00000328923 CHRNA6Q15825 494 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 SSX1Q16384 188 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 OR2B11Q5JQS5 317 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 ACER2Q5QJU3 275 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 NOTUMQ6P988 496 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 BTN2A1Q7KYR7 527 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 RHOUQ7L0Q8 258 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 PHYKPLQ8IUZ5 450 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 MCATQ8IVS2 390 aaKnown RBP11.38□□□□□ -0.59
SHMT2-201ENST00000328923 TMEM145Q8NBT3 493 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 CLEC4CQ8WTT0 213 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 NR4A3Q92570 626 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 ISG20Q96AZ6 181 aaKnown RBP11.38□□□□□ -0.59
SHMT2-201ENST00000328923 CAPNS2Q96L46 248 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 PFDN5Q99471 154 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 NFKBIZQ9BYH8 718 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 FOLH1BQ9HBA9 442 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 C14orf105Q9NVL8 296 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 BTNL2Q9UIR0 455 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 ZNF490Q9ULM2 529 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-201ENST00000328923 PIAS3Q9Y6X2 628 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 SLC9B1P1A6NJY1 282 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 FAM170BA6NMN3 283 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 ISM1B1AKI9 464 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 EEDO75530 441 aaKnown RBP11.38□□□□□ -0.59
SHMT2-201ENST00000328923 NFKB1P19838 968 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 RFC3P40938 356 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 ZFP36L2P47974 494 aaKnown RBP11.38□□□□□ -0.59
SHMT2-201ENST00000328923 SULT1E1P49888 294 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 MBTD1Q05BQ5 628 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 CAMK2DQ13557 499 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 TOMM20Q15388 145 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 MED22Q15528 200 aa11.38□□□□□ -0.59
SHMT2-201ENST00000328923 CCDC85BQ15834 202 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-201ENST00000328923 CST9Q5W186 159 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms