RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 SLC25A23Q9BV35 468 aa4.9□□□□□ -1.62
LRIT3-201ENST00000327908 BRINP2Q9C0B6 783 aa4.9□□□□□ -1.62
LRIT3-201ENST00000327908 KLHL3Q9UH77 587 aa4.9□□□□□ -1.62
LRIT3-201ENST00000327908 BCAP29Q9UHQ4 241 aa4.9□□□□□ -1.62
LRIT3-201ENST00000327908 TEKT2Q9UIF3 430 aa4.9□□□□□ -1.62
LRIT3-201ENST00000327908 CAPN7Q9Y6W3 813 aa4.9□□□□□ -1.62
LRIT3-201ENST00000327908 VSTM2BA6NLU5 285 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 MEN1O00255 615 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 GDF9O60383 454 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 PIAS1O75925 651 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 KRT75O95678 551 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 FAM107AO95990 144 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 HPP00738 406 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 EIF2S1P05198 315 aaKnown RBP4.9□□□□□ -1.63
LRIT3-201ENST00000327908 ANXA4P09525 319 aaPredicted RBP4.9□□□□□ -1.63
LRIT3-201ENST00000327908 PRR35P0CG20 571 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 PSMB5P28074 263 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 MPIP34949 423 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 STAT5AP42229 794 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 PRIM2P49643 509 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 KCNK10P57789 538 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 DDX39BQ13838 428 aaKnown RBP4.9□□□□□ -1.63
LRIT3-201ENST00000327908 TMEM64Q6YI46 380 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF574Q6ZN55 896 aaPredicted RBP4.9□□□□□ -1.63
LRIT3-201ENST00000327908 ARHGAP24Q8N264 748 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 CPSF7Q8N684 471 aaKnown RBP4.9□□□□□ -1.63
LRIT3-201ENST00000327908 FNDC5Q8NAU1 212 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 OR4K14Q8NGD5 310 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 OR56A1Q8NGH5 318 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 OR2Y1Q8NGV0 311 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF675Q8TD23 568 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 OR5P2Q8WZ92 322 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 CMTM5Q96DZ9 223 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 BBS4Q96RK4 519 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 FAM107BQ9H098 131 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 ZBTB26Q9HCK0 441 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 FGFR1OP2Q9NVK5 253 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 AIG1Q9NVV5 245 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 GIN1Q9NXP7 522 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 CALML5Q9NZT1 146 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 PTGFRNQ9P2B2 879 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 COPS7AQ9UBW8 275 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 BTNL2Q9UIR0 455 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 FARSAQ9Y285 508 aaKnown RBP4.9□□□□□ -1.63
LRIT3-201ENST00000327908 DNAH12Q6ZR08 3092 aa4.9□□□□□ -1.63
LRIT3-201ENST00000327908 A0A087WV62 115 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 A8MU76 341 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 PIP5K1BO14986 540 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 KIAA0754O94854 1291 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 STAMBPO95630 424 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF888P0CJ79 500 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 SLC35E2P0CK97 266 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 FOLR1P15328 257 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 EPORP19235 508 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 DDCP20711 480 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 MPSTP25325 297 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 GDF5P43026 501 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 CCR10P46092 362 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 EMP2P54851 167 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 PSMD4P55036 377 aaKnown RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 CDH13P55290 713 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 BTN3A2P78410 334 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 IGLV3-21P80748 117 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ZNHIT3Q15649 155 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 GPR19Q15760 415 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 SPRED3Q2MJR0 410 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 VPS26BQ4G0F5 336 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 CCDC157Q569K6 752 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 C3orf38Q5JPI3 329 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 NXNQ6DKJ4 435 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 NOXRED1Q6NXP6 359 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 COMMD6Q7Z4G1 85 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ZNF761Q86XN6 746 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ACOT4Q8N9L9 421 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 MMABQ96EY8 250 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ITCHQ96J02 903 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 SLC45A3Q96JT2 553 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 DGAT2Q96PD7 388 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 GPN2Q9H9Y4 310 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 LHX9Q9NQ69 397 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 DAPP1Q9UN19 280 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 SATB2Q9UPW6 733 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 POLHQ9Y253 713 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ADAMTS9Q9P2N4 1935 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 IGKV1-8A0A0C4DH67 115 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 SDHDO14521 159 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 PDPK1O15530 556 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 DIAPH2O60879 1101 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 CTSVO60911 334 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 GPR75O95800 540 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 HOXB3P14651 431 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 PTPN4P29074 926 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 SLC5A2P31639 672 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 S100A3P33764 101 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 TMED10P49755 219 aaKnown RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 PRR5P85299 388 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 BTKQ06187 659 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 GABPB1Q06547 395 aaPredicted RBP4.89□□□□□ -1.63
LRIT3-201ENST00000327908 FOXC1Q12948 553 aa4.89□□□□□ -1.63
LRIT3-201ENST00000327908 ELAVL1Q15717 326 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms