RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 GPSM1Q86YR5 675 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 VMP1Q96GC9 406 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 QRFPRQ96P65 431 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 SERINC2Q96SA4 455 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 KRT12Q99456 494 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 CPNE1Q99829 537 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 EFCAB11Q9BUY7 163 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 PRTFDC1Q9NRG1 225 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 DNAJC11Q9NVH1 559 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 SH3BGRL2Q9UJC5 107 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 TINAGQ9UJW2 476 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 DCHS2Q6V1P9 2916 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 PKDREJQ9NTG1 2253 aa16.53■□□□□ 0.24
PTPMT1-201ENST00000326656 USP27XA6NNY8 438 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 C4orf51C9J302 202 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 PRRG2O14669 202 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 STK16O75716 305 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 ZFAND5O76080 213 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 MYO1DO94832 1006 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 CCDC166P0CW27 439 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 STMN1P16949 149 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 HNRNPH1P31943 449 aaKnown RBP16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 GPR143P51810 404 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 MTTPP55157 894 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 ADORA2A-AS1P86434 159 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 PAGE2BQ5JRK9 111 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 TRIM40Q6P9F5 258 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 GPALPP1Q8IXQ4 340 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 SRRM1Q8IYB3 904 aaKnown RBP16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 TMEM132CQ8N3T6 1108 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 SRFBP1Q8NEF9 429 aaKnown RBP16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 KIAA1191Q96A73 305 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 PTCD3Q96EY7 689 aaKnown RBP16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 PDLIM2Q96JY6 352 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 UBXN10Q96LJ8 280 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 GPR22Q99680 433 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 CCDC77Q9BR77 488 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 ERP44Q9BS26 406 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 ROGDIQ9GZN7 287 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 REXO4Q9GZR2 422 aaKnown RBP16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 ADAP2Q9NPF8 381 aa16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 MTO1Q9Y2Z2 717 aaKnown RBP16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 YARS2Q9Y2Z4 477 aaKnown RBP16.52■□□□□ 0.24
PTPMT1-201ENST00000326656 PDZD2O15018 2839 aa16.52■□□□□ 0.23
PTPMT1-201ENST00000326656 OTOGQ6ZRI0 2925 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 TRBV11-1A0A0K0K1C0 115 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 A8MUA0 341 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 E9PLN8 166 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 TAPBPO15533 448 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 CTNSO60931 367 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 COX6B1P14854 86 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 ABOP16442 354 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 GRNP28799 593 aaKnown RBP16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 SSTR1P30872 391 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 GP5P40197 560 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 CASP2P42575 452 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 SLC13A2Q13183 592 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 TBCCQ15814 346 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 HIST2H2ACQ16777 129 aaPredicted RBP16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 RNFT1Q5M7Z0 435 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 HIST2H2AA3Q6FI13 130 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 ABHD17CQ6PCB6 329 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 GDF7Q7Z4P5 450 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 TMEM156Q8N614 296 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 CPSF7Q8N684 471 aaKnown RBP16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 C16orf52Q8NHV5 167 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 CCT6BQ92526 530 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 RBBP8Q99708 897 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 VKORC1Q9BQB6 163 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 PHACTR1Q9C0D0 580 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 TSPAN10Q9H1Z9 355 aaPredicted RBP16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 SMYD2Q9NRG4 433 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 WWOXQ9NZC7 414 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 PTBP2Q9UKA9 531 aaKnown RBP16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 ZNF490Q9ULM2 529 aaPredicted RBP16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 CLDN16Q9Y5I7 305 aa16.51■□□□□ 0.23
PTPMT1-201ENST00000326656 NCF1BA6NI72 391 aaPredicted RBP16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 NCF1CA8MVU1 366 aaPredicted RBP16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 CYR61O00622 381 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 ITGA10O75578 1167 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 CLDN14O95500 239 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 NCF1P14598 390 aaPredicted RBP16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 CD1DP15813 335 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 ELAVL4P26378 380 aaKnown RBP16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 KCNC1P48547 511 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 ST13P50502 369 aaKnown RBP16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 PLA2G16P53816 162 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 PCDH1Q08174 1060 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 E2F2Q14209 437 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 ELAVL1Q15717 326 aaKnown RBP16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 ZKSCAN8Q15776 578 aaPredicted RBP16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 PDK4Q16654 411 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 C18orf21Q32NC0 220 aaPredicted RBP16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 XKR6Q5GH73 641 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 C3orf62Q6ZUJ4 267 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 DOLPP1Q86YN1 238 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 SULF2Q8IWU5 870 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 CHERPQ8IWX8 916 aaKnown RBP16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 CYP4Z2PQ8N1L4 340 aa16.5■□□□□ 0.23
PTPMT1-201ENST00000326656 ZFP62Q8NB50 900 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms