RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 AQP11Q8NBQ7 271 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 GPR156Q8NFN8 814 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 OR56A3Q8NH54 315 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 LILRB4Q8NHJ6 448 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 WDFY2Q96P53 400 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 FAM83CQ9BQN1 747 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 ASPNQ9BXN1 380 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 CPEB1Q9BZB8 566 aaKnown RBP18.29■□□□□ 0.52
RTN4-201ENST00000317610 RACGAP1Q9H0H5 632 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 B4GALT6Q9UBX8 382 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 V9GYH0 126 aa18.29■□□□□ 0.52
RTN4-201ENST00000317610 GNG14A0A1W2PPG7 69 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 RECKO95980 971 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 SELPP16109 830 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 RHCEP18577 417 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 CNR2P34972 360 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 DDOSTP39656 456 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 ZNF763Q0D2J5 394 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 NXNL2Q5VZ03 156 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 TRIM40Q6P9F5 258 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 LAS2Q8IYD9 372 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 CPXM2Q8N436 756 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 SLC43A3Q8NBI5 491 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 FAM46DQ8NEK8 389 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 ASB15Q8WXK1 588 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 BARHL1Q9BZE3 327 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 CD84Q9UIB8 345 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 KCND3Q9UK17 655 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 CASP8AP2Q9UKL3 1982 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 SH3BGRLO75368 114 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 SEMA3DO95025 777 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 CTSOP43234 321 aaPredicted RBP18.28■□□□□ 0.52
RTN4-201ENST00000317610 RFX2P48378 723 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 PRIM2P49643 509 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 STK19P49842 368 aaPredicted RBP18.28■□□□□ 0.52
RTN4-201ENST00000317610 RPS13P62277 151 aaKnown RBP18.28■□□□□ 0.52
RTN4-201ENST00000317610 C22orf39Q6P5X5 142 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 MED8Q96G25 268 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 NDOR1Q9UHB4 597 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 OGDHLQ9ULD0 1010 aa18.28■□□□□ 0.52
RTN4-201ENST00000317610 HELZP42694 1942 aaKnown RBP18.27■□□□□ 0.52
RTN4-201ENST00000317610 GPR37L1O60883 481 aa18.27■□□□□ 0.52
RTN4-201ENST00000317610 GASTP01350 101 aa18.27■□□□□ 0.52
RTN4-201ENST00000317610 ARAFP10398 606 aa18.27■□□□□ 0.52
RTN4-201ENST00000317610 RPS19P39019 145 aaKnown RBP18.27■□□□□ 0.52
RTN4-201ENST00000317610 PNLIPRP1P54315 467 aa18.27■□□□□ 0.52
RTN4-201ENST00000317610 SNRPGP62308 76 aaKnown RBP18.27■□□□□ 0.52
RTN4-201ENST00000317610 PCM1Q15154 2024 aa18.27■□□□□ 0.52
RTN4-201ENST00000317610 CYP27C1Q4G0S4 372 aa18.27■□□□□ 0.52
RTN4-201ENST00000317610 OR8H2Q8N162 312 aa18.27■□□□□ 0.52
RTN4-201ENST00000317610 ST6GAL2Q96JF0 529 aa18.27■□□□□ 0.52
RTN4-201ENST00000317610 LMLNQ96KR4 655 aa18.27■□□□□ 0.52
RTN4-201ENST00000317610 NMNAT1Q9HAN9 279 aaPredicted RBP18.27■□□□□ 0.52
RTN4-201ENST00000317610 PLXNA2O75051 1894 aa18.27■□□□□ 0.52
RTN4-201ENST00000317610 FURINP09958 794 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 TRAPPC2P0DI81 140 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 TRAPPC2BP0DI82 140 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 IMPA1P29218 277 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 CSTF2P33240 577 aaKnown RBP eCLIP18.27■□□□□ 0.51
RTN4-201ENST00000317610 MPEG1Q2M385 716 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 CCSMST1Q4G0I0 132 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 MPPE1Q53F39 396 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 TMEM201Q5SNT2 666 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 MEDAGQ5VYS4 303 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 ZNF517Q6ZMY9 492 aaPredicted RBP18.27■□□□□ 0.51
RTN4-201ENST00000317610 NEDD4LQ96PU5 975 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 VPS35Q96QK1 796 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 CNPPD1Q9BV87 410 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 ZNF334Q9HCZ1 680 aaPredicted RBP18.27■□□□□ 0.51
RTN4-201ENST00000317610 TAS2R9Q9NYW1 312 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 SEC14L4Q9UDX3 406 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 MUTYHQ9UIF7 546 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 ACSL6Q9UKU0 697 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 HS3ST2Q9Y278 367 aa18.27■□□□□ 0.51
RTN4-201ENST00000317610 A0A1W2PQ67 120 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 TMEM88BA6NKF7 163 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 FADS2P1A8MWK0 482 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 HOXC11O43248 304 aaPredicted RBP18.26■□□□□ 0.51
RTN4-201ENST00000317610 TXNDC8Q6A555 127 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 MED27Q6P2C8 311 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 SLCO4C1Q6ZQN7 724 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.26■□□□□ 0.516e-6■□□□□ 8.7
RTN4-201ENST00000317610 ANGPT4Q9Y264 503 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 TRBC2A0A5B9 178 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 ANKRD34BA5PLL1 514 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 TMEM202A6NGA9 273 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 CENPBD1B2RD01 187 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 AP3D1O14617 1153 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 NPC1O15118 1278 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 ENTPD6O75354 484 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 KRT75O95678 551 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 RPL3P39023 403 aaKnown RBP18.26■□□□□ 0.51
RTN4-201ENST00000317610 CRYBB2P43320 205 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 GANABQ14697 944 aaKnown RBP18.26■□□□□ 0.51
RTN4-201ENST00000317610 ZNF79Q15937 498 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 TCTN1Q2MV58 587 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 RNLSQ5VYX0 342 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 VN1R5Q7Z5H4 357 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 RAB43Q86YS6 212 aa18.26■□□□□ 0.51
RTN4-201ENST00000317610 SLC30A8Q8IWU4 369 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms