RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 CEP128Q6ZU80 1094 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 ISCA2Q86U28 154 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 ZNF595Q8IYB9 648 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 KIF2BQ8N4N8 673 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 EXT2Q93063 718 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 TMEM125Q96AQ2 219 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 SCMH1Q96GD3 660 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 AICDAQ9GZX7 198 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 ALG9Q9H6U8 611 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 NUDT4Q9NZJ9 180 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 SUCOQ9UBS9 1254 aaKnown RBP16.62■□□□□ 0.25
TPM1-203ENST00000317516 ZNF490Q9ULM2 529 aaPredicted RBP16.62■□□□□ 0.25
TPM1-203ENST00000317516 ACOT9Q9Y305 439 aa16.62■□□□□ 0.25
TPM1-203ENST00000317516 TRGV8A0A0C4DH27 118 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 CCDC189A1A4V9 331 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 SYCE1LA8MT33 242 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 C4orf51C9J302 202 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 MAN1A2O60476 641 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 KERAO60938 352 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 FAM155BO75949 473 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 SLC35E2BP0CK96 405 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 CASP2P42575 452 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 KCNC1P48547 511 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 MLF1P58340 268 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 ALDH6A1Q02252 535 aaKnown RBP16.61■□□□□ 0.25
TPM1-203ENST00000317516 EFTUD2Q15029 972 aaKnown RBP eCLIP16.61■□□□□ 0.251e-5■■■□□ 16.7
TPM1-203ENST00000317516 TRADDQ15628 312 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 MAPKAPK3Q16644 382 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 C8orf74Q6P047 294 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 ABHD17CQ6PCB6 329 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 SCUBE1Q8IWY4 988 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 C7orf57Q8NEG2 295 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 NFAM1Q8NET5 270 aaPredicted RBP16.61■□□□□ 0.25
TPM1-203ENST00000317516 B3GNT7Q8NFL0 401 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 THAP3Q8WTV1 239 aaPredicted RBP16.61■□□□□ 0.25
TPM1-203ENST00000317516 QRFPRQ96P65 431 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 KCNC2Q96PR1 638 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 PNO1Q9NRX1 252 aaKnown RBP16.61■□□□□ 0.25
TPM1-203ENST00000317516 OPTCQ9UBM4 332 aa16.61■□□□□ 0.25
TPM1-203ENST00000317516 SVILO95425 2214 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 UTP20O75691 2785 aaKnown RBP16.6■□□□□ 0.25
TPM1-203ENST00000317516 A0A087X1B8 175 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 ASPDHA6ND91 283 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 SUPT3HB4E1H0 165 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 K7EPI3 171 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 ZG16O60844 167 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 SUPT3HO75486 399 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 SLC25A12O75746 678 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 NEURL1O76050 574 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 MYO1DO94832 1006 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 COL8A1P27658 744 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 TPP2P29144 1249 aaPredicted RBP16.6■□□□□ 0.25
TPM1-203ENST00000317516 SERPINB1P30740 379 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 PHBP35232 272 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 PMP22Q01453 160 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 GUCY2DQ02846 1103 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 FAM83EQ2M2I3 478 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 TMEM35AQ53FP2 167 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 MED27Q6P2C8 311 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 CHSY3Q70JA7 882 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 GALNTL5Q7Z4T8 443 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 CMC1Q7Z7K0 106 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 SLC34A3Q8N130 599 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 CCDC77Q9BR77 488 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 TRIM45Q9H8W5 580 aaPredicted RBP16.6■□□□□ 0.25
TPM1-203ENST00000317516 ADGRE2Q9UHX3 823 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 DAPP1Q9UN19 280 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 SPACA6W5XKT8 324 aa16.6■□□□□ 0.25
TPM1-203ENST00000317516 PRAMEF4O60810 478 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 CTNSO60931 367 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 EPB42P16452 691 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 TRHRP34981 398 aaPredicted RBP16.59■□□□□ 0.25
TPM1-203ENST00000317516 MSH2P43246 934 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 ST13P50502 369 aaKnown RBP16.59■□□□□ 0.25
TPM1-203ENST00000317516 HLCSP50747 726 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 LIM2P55344 173 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 SLC7A5Q01650 507 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 MROH9Q5TGP6 573 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 PRAMEF9Q5VWM5 478 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 VN1R5Q7Z5H4 357 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 ARMC10Q8N2F6 343 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 TMEM132CQ8N3T6 1108 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 FAM47BQ8NA70 645 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 RHEBL1Q8TAI7 183 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 NXNL1Q96CM4 212 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 VMP1Q96GC9 406 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 F2RL3Q96RI0 385 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 ATOH8Q96SQ7 321 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 LRRC1Q9BTT6 524 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 TBCDQ9BTW9 1192 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 HES7Q9BYE0 225 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 TSPYL1Q9H0U9 437 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 LYRM4Q9HD34 91 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 ADAP2Q9NPF8 381 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 PRDM7Q9NQW5 492 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 IGSF5Q9NSI5 407 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 MTRF1LQ9UGC7 380 aaKnown RBP16.59■□□□□ 0.25
TPM1-203ENST00000317516 FBXW2Q9UKT8 454 aa16.59■□□□□ 0.25
TPM1-203ENST00000317516 PPIEQ9UNP9 301 aaKnown RBP16.59■□□□□ 0.25
TPM1-203ENST00000317516 ANGPTL3Q9Y5C1 460 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms