RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 SAGE2PA6NJ88 616 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 SYCE1LA8MT33 242 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 RTCAO00442 366 aaKnown RBP13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 OR7A17O14581 309 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 RIPK2O43353 540 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 PRMT3O60678 531 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 S100BP04271 92 aaPredicted RBP13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 INHBAP08476 426 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 SERPINB9P50453 376 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 ST13P50502 369 aaKnown RBP13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 GPR143P51810 404 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 TDGF1P3P51864 188 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 OR4D2P58180 307 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 NR6A1Q15406 480 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 EIF2S3LQ2VIR3 472 aaKnown RBP13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 PAGE2BQ5JRK9 111 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 ACER2Q5QJU3 275 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 FAM219BQ5XKK7 198 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 GOLGA7Q7Z5G4 137 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 ZNF227Q86WZ6 799 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 GSPT2Q8IYD1 628 aaKnown RBP13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 BEST3Q8N1M1 668 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 TEX9Q8N6V9 391 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 MDS2Q8NDY4 140 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 WDR20Q8TBZ3 569 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 GRHL3Q8TE85 626 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 MZB1Q8WU39 189 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 SERINC2Q96SA4 455 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 VPS11Q9H270 941 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 ZBTB26Q9HCK0 441 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 XPR1Q9UBH6 696 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 MMACHCQ9Y4U1 282 aa13.67□□□□□ -0.22
PPP1CA-201ENST00000312989 UTP20O75691 2785 aaKnown RBP13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 A0A087WUV0 522 aaPredicted RBP13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 TRIM49D1C9J1S8 452 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 POC1B-GALNT4F8VUJ3 575 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 WISP2O76076 250 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 ETHE1O95571 254 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 EPB42P16452 691 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 MTTPP55157 894 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 ARG2P78540 354 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 ZNF33BQ06732 778 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 TUBA3CQ13748 450 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 ZNF468Q5VIY5 522 aaPredicted RBP13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 METTL2BQ6P1Q9 378 aaKnown RBP13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 MED27Q6P2C8 311 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 TUBA3EQ6PEY2 450 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 ADGRD1Q6QNK2 874 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 TIFABQ6ZNK6 161 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 PTGR2Q8N8N7 351 aaPredicted RBP13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 L3MBTL4Q8NA19 623 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 FAM47BQ8NA70 645 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 OR52B6Q8NGF0 335 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 OR1N1Q8NGS0 311 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 HUS1BQ8NHY5 278 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 FAR1Q8WVX9 515 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 CCT6BQ92526 530 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 NSUN5Q96P11 429 aaKnown RBP13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 SIGLEC12Q96PQ1 595 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 SORBS1Q9BX66 1292 aaKnown RBP13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 DMRT3Q9NQL9 472 aa13.66□□□□□ -0.22
PPP1CA-201ENST00000312989 TRAV17A0A0B4J275 112 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 DYTNA2CJ06 578 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 TMEM200CA6NKL6 621 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 H0YIV9 168 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 B3GALT2O43825 422 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 NEURL1O76050 574 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 TGFB1P01137 390 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 RHOXF2BP0C7M4 288 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 GFAPP14136 432 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 HIST1H1TP22492 207 aaPredicted RBP13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 ATP5A1P25705 553 aaKnown RBP13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 CNTFP26441 200 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 HSD17B7P56937 341 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 AP2B1P63010 937 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 TRAF3Q13114 568 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 DEPDC1Q5TB30 811 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 ABHD17BQ5VST6 288 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 KHDRBS2Q5VWX1 349 aaKnown RBP13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 LIPJQ5W064 366 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 TRIM40Q6P9F5 258 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 TRMT10CQ7L0Y3 403 aaKnown RBP13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 IFT20Q8IY31 132 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 LGI4Q8N135 537 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 ACOT4Q8N9L9 421 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 ST6GALNAC3Q8NDV1 305 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 KCNC2Q96PR1 638 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 MAPKAP1Q9BPZ7 522 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 RHOXF2Q9BQY4 288 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 HES7Q9BYE0 225 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 OR51B5Q9H339 312 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 STMN3Q9NZ72 180 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 PCTPQ9UKL6 214 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 RNF11Q9Y3C5 154 aa13.65□□□□□ -0.22
PPP1CA-201ENST00000312989 WIPF3A6NGB9 483 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 A8MUI8 341 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 STX16-NPEPL1H3BU86 382 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 PSMD12O00232 456 aaPredicted RBP13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 PLPP1O14494 284 aa13.64□□□□□ -0.23
PPP1CA-201ENST00000312989 STX16O14662 325 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms