RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 BTN3A2P78410 334 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 GALNT1Q10472 559 aaPredicted RBP16.78■□□□□ 0.28
CCS-201ENST00000310190 RUNX2Q13950 521 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 LIPMQ5VYY2 423 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 OR4C11Q6IEV9 310 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 RIPOR1Q6ZS17 1223 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 FRMD7Q6ZUT3 714 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 SRRM1Q8IYB3 904 aaKnown RBP16.78■□□□□ 0.28
CCS-201ENST00000310190 CLEC1AQ8NC01 280 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 IMMP1LQ96LU5 166 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 SMC6Q96SB8 1091 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 SERPINI1Q99574 410 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 SMAD5Q99717 465 aaKnown RBP16.78■□□□□ 0.28
CCS-201ENST00000310190 CENPKQ9BS16 269 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 ACSS2Q9NR19 701 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 C5AR2Q9P296 337 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 C19orf25Q9UFG5 118 aaPredicted RBP16.78■□□□□ 0.28
CCS-201ENST00000310190 FBXL4Q9UKA2 621 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 ADAM29Q9UKF5 820 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 SNX6Q9UNH7 406 aa16.78■□□□□ 0.28
CCS-201ENST00000310190 ARGFXA6NJG6 315 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 PLPP1O14494 284 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 TGFB1P01137 390 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 C8orf89P0DMQ9 161 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 PCNAP12004 261 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 ICAM2P13598 275 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 ETV4P43268 484 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 PLA2G16P53816 162 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 HSD17B7P56937 341 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 AP2B1P63010 937 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 ASPHQ12797 758 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 MYBPC3Q14896 1274 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 PCLAFQ15004 111 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 CPZQ66K79 652 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 MRM1Q6IN84 353 aaKnown RBP16.77■□□□□ 0.28
CCS-201ENST00000310190 ZNF793Q6ZN11 406 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 RNF165Q6ZSG1 346 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 SCUBE1Q8IWY4 988 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 ZNF595Q8IYB9 648 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 ACOT4Q8N9L9 421 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 OR6Y1Q8NGX8 325 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 TRPC4APQ8TEL6 797 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 PPP4R1Q8TF05 950 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 CCT6BQ92526 530 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 ABHD17AQ96GS6 310 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 PEX11GQ96HA9 241 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 CDK15Q96Q40 435 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 MTERF1Q99551 399 aaKnown RBP16.77■□□□□ 0.28
CCS-201ENST00000310190 TUBB6Q9BUF5 446 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 YIPF2Q9BWQ6 316 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 RIC8BQ9NVN3 520 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 MS4A12Q9NXJ0 267 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 CLDN16Q9Y5I7 305 aa16.77■□□□□ 0.28
CCS-201ENST00000310190 TCRBV16S1A1N1A0A5B0 115 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 ZNF860A6NHJ4 632 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 CDK2AP1O14519 115 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 RGS16O15492 202 aaPredicted RBP16.76■□□□□ 0.27
CCS-201ENST00000310190 TRIM13O60858 407 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 JRKO75564 520 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 B3GALT4O96024 378 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 BSGP35613 385 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 NAGLUP54802 743 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 LIM2P55344 173 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 RPS13P62277 151 aaKnown RBP16.76■□□□□ 0.27
CCS-201ENST00000310190 IFT88Q13099 833 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 BIKQ13323 160 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 COL9A2Q14055 689 aaPredicted RBP16.76■□□□□ 0.27
CCS-201ENST00000310190 PCOLCEQ15113 449 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 TERF2Q15554 542 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 AP5B1Q2VPB7 878 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 JMJD6Q6NYC1 403 aaPredicted RBP16.76■□□□□ 0.27
CCS-201ENST00000310190 IGFL2Q6UWQ7 119 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 IGFL3Q6UXB1 125 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 SHISA6Q6ZSJ9 500 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 GPRIN3Q6ZVF9 776 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 RPS27LQ71UM5 84 aaKnown RBP16.76■□□□□ 0.27
CCS-201ENST00000310190 EXOC3L1Q86VI1 746 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 SHISA5Q8N114 240 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 GALNT16Q8N428 558 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 C9orf43Q8TAL5 461 aaPredicted RBP16.76■□□□□ 0.27
CCS-201ENST00000310190 AGAP11Q8TF27 550 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 METTL21AQ8WXB1 218 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 WDR77Q9BQA1 342 aaPredicted RBP16.76■□□□□ 0.27
CCS-201ENST00000310190 IQCGQ9H095 443 aaKnown RBP16.76■□□□□ 0.27
CCS-201ENST00000310190 OR51B5Q9H339 312 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 PRDM9Q9NQV7 894 aa16.76■□□□□ 0.27
CCS-201ENST00000310190 PPIEQ9UNP9 301 aaKnown RBP16.76■□□□□ 0.27
CCS-201ENST00000310190 TNRC6AQ8NDV7 1962 aaKnown RBP16.75■□□□□ 0.27
CCS-201ENST00000310190 HELZ2Q9BYK8 2649 aaKnown RBP16.75■□□□□ 0.27
CCS-201ENST00000310190 NPIPB8E9PQR5 432 aa16.75■□□□□ 0.27
CCS-201ENST00000310190 PSMD12O00232 456 aaPredicted RBP16.75■□□□□ 0.27
CCS-201ENST00000310190 FFAR3O14843 346 aa16.75■□□□□ 0.27
CCS-201ENST00000310190 GPR42O15529 346 aa16.75■□□□□ 0.27
CCS-201ENST00000310190 PRMT3O60678 531 aa16.75■□□□□ 0.27
CCS-201ENST00000310190 ETHE1O95571 254 aa16.75■□□□□ 0.27
CCS-201ENST00000310190 KRT6AP02538 564 aa16.75■□□□□ 0.27
CCS-201ENST00000310190 KRT6BP04259 564 aa16.75■□□□□ 0.27
CCS-201ENST00000310190 SERPINB5P36952 375 aa16.75■□□□□ 0.27
CCS-201ENST00000310190 KRT6CP48668 564 aa16.75■□□□□ 0.27
CCS-201ENST00000310190 SLC18A1P54219 525 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms