RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 MZT2BQ6NZ67 158 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 DHRS4L2Q6PKH6 230 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 PLEKHM3Q6ZWE6 761 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 SHFQ7M4L6 423 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 PHYKPLQ8IUZ5 450 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 PHC2Q8IXK0 858 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 TCEANCQ8N8B7 351 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 OR6C4Q8NGE1 309 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 GTF2H4Q92759 462 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 C11orf24Q96F05 449 aaPredicted RBP12.17□□□□□ -0.46
RETREG3-201ENST00000309428 CCDC120Q96HB5 630 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 PRKAG2Q9UGJ0 569 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 PCDHB1Q9Y5F3 818 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 SCN10AQ9Y5Y9 1956 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 FADS2P1A8MWK0 482 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 MYOGP15173 224 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 TM4SF4P48230 202 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 VEGFBP49765 207 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 MAPK12P53778 367 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 MAD2L1BPQ15013 274 aaPredicted RBP12.17□□□□□ -0.46
RETREG3-201ENST00000309428 MPPE1Q53F39 396 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 ZNF691Q5VV52 312 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 SLC8B1Q6J4K2 584 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 CERS6Q6ZMG9 384 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 VN1R5Q7Z5H4 357 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 LRRC17Q8N6Y2 441 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 GPR151Q8TDV0 419 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 FRMD6Q96NE9 622 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 UHRF1Q96T88 793 aaPredicted RBP12.17□□□□□ -0.46
RETREG3-201ENST00000309428 DUSP26Q9BV47 211 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 DNAJC11Q9NVH1 559 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 B3GNT3Q9Y2A9 372 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 GSTK1Q9Y2Q3 226 aa12.17□□□□□ -0.46
RETREG3-201ENST00000309428 NYNRINQ9P2P1 1898 aaKnown RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 JRKO75564 520 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 CCNB2O95067 398 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 RPLP2P05387 115 aaKnown RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 DAPP51397 102 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 RPL6Q02878 288 aaKnown RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 MRPL58Q14197 206 aaKnown RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 AGAP6Q5VW22 663 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 SFTPA1Q8IWL2 248 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 FAM9CQ8IZT9 166 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 MMP21Q8N119 569 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 IPCEF1Q8WWN9 437 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 RAB8BQ92930 207 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 MSANTD3Q96H12 275 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 AGAP4Q96P64 663 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 TLX2O43763 284 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 ERAL1O75616 437 aaKnown RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 BUD31P41223 144 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 RPS13P62277 151 aaKnown RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 TUBA1BP68363 451 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 MVKQ03426 396 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 DBPQ10586 325 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 CTF1Q16619 201 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 LRIT3Q3SXY7 679 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 TUBA1AQ71U36 451 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 PAPD5Q8NDF8 572 aaKnown RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 COL26A1Q96A83 441 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 COL21A1Q96P44 957 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 ACTL8Q9H568 366 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 CCDC177Q9NQR7 707 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 RIMKLBQ9ULI2 386 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 A0A1W2PQ09 198 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 IGLV3-27P01718 113 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 PRKAR1AP10644 381 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 SLC2A2P11168 524 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 EPCAMP16422 314 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 RORCP51449 518 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 PTSQ03393 145 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 CSTF1Q05048 431 aaKnown RBP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 C2orf80Q0P641 193 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 HSPB3Q12988 150 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 TARDBPQ13148 414 aaKnown RBP eCLIP12.16□□□□□ -0.46
RETREG3-201ENST00000309428 VMACQ2NL98 169 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 FRG2Q64ET8 278 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 TTC23LQ6PF05 361 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 OR8J3Q8NGG0 315 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 NFKBIDQ8NI38 313 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 BPIFB1Q8TDL5 484 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 ARSGQ96EG1 525 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 FRG2BQ96QU4 278 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 MBOAT4Q96T53 435 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 SLC22A4Q9H015 551 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 TM9SF3Q9HD45 589 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 EQTNQ9NQ60 294 aa12.16□□□□□ -0.46
RETREG3-201ENST00000309428 GRXCR1A8MXD5 290 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 K7ESM1 405 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 STX16O14662 325 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 GABARAPO95166 117 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 CPNE6O95741 557 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 PTHP01270 115 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 ERVFC1P60507 584 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 ZNF45Q02386 682 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 MESP2Q0VG99 397 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 GALNT1Q10472 559 aaPredicted RBP12.15□□□□□ -0.46
RETREG3-201ENST00000309428 ZNF181Q2M3W8 571 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 TPRG1Q6ZUI0 275 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms