RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 TRAF3Q13114 568 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 ADNP2Q6IQ32 1131 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 CYP20A1Q6UW02 462 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 QSOX2Q6ZRP7 698 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 ASB18Q6ZVZ8 466 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 LAPTM4BQ86VI4 370 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 NUDT13Q86X67 352 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 CA13Q8N1Q1 262 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 MYRIPQ8NFW9 859 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 SELENOMQ8WWX9 145 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 SMIM10Q96HG1 83 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 BBC3Q96PG8 261 aaPredicted RBP18.69■□□□□ 0.58
VEGFB-201ENST00000309422 LPAR4Q99677 370 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 OR51B5Q9H339 312 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 ZNF71Q9NQZ8 489 aaPredicted RBP18.69■□□□□ 0.58
VEGFB-201ENST00000309422 PHF11Q9UIL8 331 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 TP53TG5Q9Y2B4 290 aa18.69■□□□□ 0.58
VEGFB-201ENST00000309422 MAGEB17A8MXT2 336 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 SEMA3DO95025 777 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 ENO1P06733 434 aaKnown RBP18.68■□□□□ 0.58
VEGFB-201ENST00000309422 SBK3P0C264 359 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 HIST1H1TP22492 207 aaPredicted RBP18.68■□□□□ 0.58
VEGFB-201ENST00000309422 TLX1P31314 330 aaPredicted RBP18.68■□□□□ 0.58
VEGFB-201ENST00000309422 SLC13A2Q13183 592 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 CUL3Q13618 768 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 MYBPC3Q14896 1274 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 DEPDC1Q5TB30 811 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 LIPMQ5VYY2 423 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 PCSK4Q6UW60 755 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 PAGE2Q7Z2X7 111 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 CPEB2Q7Z5Q1 589 aaKnown RBP18.68■□□□□ 0.58
VEGFB-201ENST00000309422 HOMEZQ8IX15 550 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 EFCAB3Q8N7B9 438 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 TEX19Q8NA77 164 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 PTCHD1Q96NR3 888 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 SLC29A3Q9BZD2 475 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 LHPPQ9H008 270 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 WDR41Q9HAD4 459 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 LYRM4Q9HD34 91 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 PRDM9Q9NQV7 894 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 MS4A12Q9NXJ0 267 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 IGHV1-45A0A0A0MS14 117 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 SAP18O00422 153 aaKnown RBP18.68■□□□□ 0.58
VEGFB-201ENST00000309422 DPM1O60762 260 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 COX6A1P12074 109 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 TSPAN8P19075 237 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 BUD31P41223 144 aaPredicted RBP18.68■□□□□ 0.58
VEGFB-201ENST00000309422 OR4D2P58180 307 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 ZNF844Q08AG5 666 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 RAPSNQ13702 412 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 EXT1Q16394 746 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 SGO1Q5FBB7 561 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 AGAP7PQ5VUJ5 663 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 OR4C11Q6IEV9 310 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 TMEM205Q6UW68 189 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 PARP9Q8IXQ6 854 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 ZNF595Q8IYB9 648 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 TMEM151AQ8N4L1 468 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 CDYL2Q8N8U2 506 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 FDCSPQ8NFU4 85 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 THOC3Q96J01 351 aaKnown RBP18.68■□□□□ 0.58
VEGFB-201ENST00000309422 AGAP4Q96P64 663 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 QRFPRQ96P65 431 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 EPS8L2Q9H6S3 715 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 ZBTB26Q9HCK0 441 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 PRTFDC1Q9NRG1 225 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 PSD3Q9NYI0 1048 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 TEKT2Q9UIF3 430 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 PPT2Q9UMR5 302 aa18.68■□□□□ 0.58
VEGFB-201ENST00000309422 LOC102723996A0A087X1L8 192 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 FOXO6A8MYZ6 492 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 DNAJB13P59910 316 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 UNC50Q53HI1 259 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 LRIG3Q6UXM1 1119 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 RIPOR1Q6ZS17 1223 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 ACOT4Q8N9L9 421 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 FAM47BQ8NA70 645 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 PLPP5Q8NEB5 264 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 WDR20Q8TBZ3 569 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 METTL6Q8TCB7 284 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 MTFMTQ96DP5 389 aaKnown RBP18.67■□□□□ 0.58
VEGFB-201ENST00000309422 ZNF700Q9H0M5 742 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 MID1IP1Q9NPA3 183 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 LYARQ9NX58 379 aaKnown RBP18.67■□□□□ 0.58
VEGFB-201ENST00000309422 C5AR2Q9P296 337 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 EMCNQ9ULC0 261 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 DAPP1Q9UN19 280 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 SLC12A4Q9UP95 1085 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 PLLPQ9Y342 182 aa18.67■□□□□ 0.58
VEGFB-201ENST00000309422 MDC1Q14676 2089 aaKnown RBP18.67■□□□□ 0.58
VEGFB-201ENST00000309422 ULK1O75385 1050 aa18.66■□□□□ 0.58
VEGFB-201ENST00000309422 SPAG7O75391 227 aa18.66■□□□□ 0.58
VEGFB-201ENST00000309422 CEACAM4O75871 244 aa18.66■□□□□ 0.58
VEGFB-201ENST00000309422 SEC24DO94855 1032 aaPredicted RBP18.66■□□□□ 0.58
VEGFB-201ENST00000309422 OR4F21O95013 312 aa18.66■□□□□ 0.58
VEGFB-201ENST00000309422 CPN2P22792 545 aa18.66■□□□□ 0.58
VEGFB-201ENST00000309422 ATP5A1P25705 553 aaKnown RBP18.66■□□□□ 0.58
VEGFB-201ENST00000309422 PPP2R1BP30154 601 aa18.66■□□□□ 0.58
VEGFB-201ENST00000309422 NAGLUP54802 743 aa18.66■□□□□ 0.58
VEGFB-201ENST00000309422 LIM2P55344 173 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms