RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 EIF2DP41214 584 aaKnown RBP13.99□□□□□ -0.17
PTPN9-201ENST00000306726 IL12RB1P42701 662 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 SLC14A2Q15849 920 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 GPRC6AQ5T6X5 926 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 TPGS2Q68CL5 300 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 DPP10Q8N608 796 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 CHST14Q8NCH0 376 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 PPCDCQ96CD2 204 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 CPPED1Q9BRF8 314 aaPredicted RBP13.99□□□□□ -0.17
PTPN9-201ENST00000306726 HDHD5Q9BXW7 423 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 SLIRPQ9GZT3 109 aaKnown RBP13.99□□□□□ -0.17
PTPN9-201ENST00000306726 CLMPQ9H6B4 373 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 GORASP2Q9H8Y8 452 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 FNIP2Q9P278 1114 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 MUTYHQ9UIF7 546 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 ZNF222Q9UK12 451 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 IFT52Q9Y366 437 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 HSPB11Q9Y547 144 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 SPAG17Q6Q759 2223 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 KCNK5O95279 499 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 EFEMP2O95967 443 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 EPOP01588 193 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 HLA-EP13747 358 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 PCMT1P22061 227 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 CD70P32970 193 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 BMPR1AP36894 532 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 MRPL28Q13084 256 aaKnown RBP13.99□□□□□ -0.17
PTPN9-201ENST00000306726 OR2G6Q5TZ20 316 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 CCNB1IP1Q9NPC3 277 aa13.99□□□□□ -0.17
PTPN9-201ENST00000306726 FAM240BA0A1B0GVZ2 78 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 A0A1W2PQ09 198 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 SOBPA7XYQ1 873 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 DYRK3O43781 588 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 MAGEA11P43364 429 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 CSRP3P50461 194 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 GAB1Q13480 694 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 CBX2Q14781 532 aaPredicted RBP13.98□□□□□ -0.17
PTPN9-201ENST00000306726 NXPE1Q8N323 547 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 GATAD2BQ8WXI9 593 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 DOK1Q99704 481 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 KCTD5Q9NXV2 234 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 DPP7Q9UHL4 492 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 HTTP42858 3142 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 TSC2P49815 1807 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 CPSF4LA6NMK7 179 aaKnown RBP13.98□□□□□ -0.17
PTPN9-201ENST00000306726 YY2O15391 372 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 WBP4O75554 376 aaKnown RBP13.98□□□□□ -0.17
PTPN9-201ENST00000306726 SLC16A8O95907 504 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 ADORA3P0DMS8 318 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 PSMA1P25786 263 aaKnown RBP13.98□□□□□ -0.17
PTPN9-201ENST00000306726 PDHA2P29803 388 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 CD6P30203 668 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 MANFP55145 182 aaKnown RBP13.98□□□□□ -0.17
PTPN9-201ENST00000306726 SNAPC1Q16533 368 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 GLB1L3Q8NCI6 653 aaPredicted RBP13.98□□□□□ -0.17
PTPN9-201ENST00000306726 MRPS31Q92665 395 aaKnown RBP13.98□□□□□ -0.17
PTPN9-201ENST00000306726 SLC35B4Q969S0 331 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 COQ8BQ96D53 544 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 COL21A1Q96P44 957 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 NECTIN3Q9NQS3 549 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 C8orf4Q9NR00 106 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 NLKQ9UBE8 527 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 PCDHB1Q9Y5F3 818 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 TRBV23OR9-2A0A075B6M9 112 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 A0A1W2PRU2 124 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 LATO43561 262 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 ENTPD6O75354 484 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 ETHE1O95571 254 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 IGSF6O95976 241 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 EBLN1P0CF75 366 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 CLDN8P56748 225 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 PIN1Q13526 163 aaPredicted RBP13.98□□□□□ -0.17
PTPN9-201ENST00000306726 IQCCQ4KMZ1 466 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 ATAD3CQ5T2N8 411 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 PLET1Q6UQ28 207 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 TP53I13Q8NBR0 393 aaPredicted RBP13.98□□□□□ -0.17
PTPN9-201ENST00000306726 RDH12Q96NR8 316 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 RIOK2Q9BVS4 552 aaKnown RBP13.98□□□□□ -0.17
PTPN9-201ENST00000306726 TRMT61BQ9BVS5 477 aaKnown RBP13.98□□□□□ -0.17
PTPN9-201ENST00000306726 ZNF624Q9P2J8 865 aaPredicted RBP13.98□□□□□ -0.17
PTPN9-201ENST00000306726 B4GALT6Q9UBX8 382 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 PCDHGA6Q9Y5G7 932 aa13.98□□□□□ -0.17
PTPN9-201ENST00000306726 MYOFQ9NZM1 2061 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 TRAV6A0A075B6T7 132 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 ANKRD28O15084 1053 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 SLC28A2O43868 658 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 CCNB2O95067 398 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 HMGCLP35914 325 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 RGS6P49758 472 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 HYAL4Q2M3T9 481 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 AGAP7PQ5VUJ5 663 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 PPP2R2DQ66LE6 453 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 THOC6Q86W42 341 aaKnown RBP13.97□□□□□ -0.17
PTPN9-201ENST00000306726 GPR150Q8NGU9 434 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 C8orf48Q96LL4 319 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 ZNF300Q96RE9 604 aaPredicted RBP13.97□□□□□ -0.17
PTPN9-201ENST00000306726 CDCP1Q9H5V8 836 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 MRPL17Q9NRX2 175 aaKnown RBP13.97□□□□□ -0.17
PTPN9-201ENST00000306726 SEMA3GQ9NS98 782 aa13.97□□□□□ -0.17
PTPN9-201ENST00000306726 ZSCAN5BA6NJL1 495 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms