RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ZNF180Q9UJW8 692 aa24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 MRPS33Q9Y291 106 aaKnown RBP24.81■■□□□ 1.56
CDKN2A-201ENST00000304494 ANKUB1A6NFN9 424 aa24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 CLDN4O14493 209 aa24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 KLK8O60259 260 aa24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 RAB38P57729 211 aa24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 RCN2Q14257 317 aa24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 EIF2S3LQ2VIR3 472 aaKnown RBP24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 TMEM35AQ53FP2 167 aa24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 PRR7Q8TB68 274 aa24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 FAR1Q8WVX9 515 aa24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 GPR78Q96P69 363 aa24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 F2RL3Q96RI0 385 aa24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 ADGRE2Q9UHX3 823 aa24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 TNPO3Q9Y5L0 923 aaKnown RBP24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 SETXQ7Z333 2677 aaKnown RBP24.8■■□□□ 1.56
CDKN2A-201ENST00000304494 CPAMD8Q8IZJ3 1885 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 SAGE2PA6NJ88 616 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 POC1B-GALNT4F8VUJ3 575 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 F10P00742 488 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 PCNAP12004 261 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 MAGEA12P43365 314 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 HSD17B7P56937 341 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 GRHL2Q6ISB3 625 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 METTL2BQ6P1Q9 378 aaKnown RBP24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 LGI4Q8N135 537 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 BCORP1Q8N888 145 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 ST6GALNAC3Q8NDV1 305 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 ZNF473Q8WTR7 871 aaKnown RBP24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 NECTIN3Q9NQS3 549 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 NFU1Q9UMS0 254 aa24.79■■□□□ 1.56
CDKN2A-201ENST00000304494 SYNDIG1LA6NDD5 238 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 RBP1P09455 135 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 COL6A2P12110 1019 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 PIK3CGP48736 1102 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 PCBP2Q15366 365 aaKnown RBP eCLIP24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 TSNAXIP1Q2TAA8 658 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 TECRLQ5HYJ1 363 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 FCRLBQ6BAA4 426 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 CHSY3Q70JA7 882 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 CRLF3Q8IUI8 442 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 ZNF595Q8IYB9 648 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 BEST3Q8N1M1 668 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 OR7G3Q8NG95 312 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 ELP5Q8TE02 316 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 TBCDQ9BTW9 1192 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 MS4A8Q9BY19 250 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 PRDM7Q9NQW5 492 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 PRTFDC1Q9NRG1 225 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 CPSF2Q9P2I0 782 aaKnown RBP24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 TMCO1Q9UM00 188 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 DAPP1Q9UN19 280 aa24.78■■□□□ 1.56
CDKN2A-201ENST00000304494 PRAMEF2O60811 474 aa24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 EDN3P14138 238 aa24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 CERS1P27544 350 aa24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 LIM2P55344 173 aa24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 SLC13A2Q13183 592 aa24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 LIPJQ5W064 366 aa24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 TRMT10CQ7L0Y3 403 aaKnown RBP24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 MYLK4Q86YV6 388 aaPredicted RBP24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 SCUBE1Q8IWY4 988 aa24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 FAM47BQ8NA70 645 aa24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 UHMK1Q8TAS1 419 aaKnown RBP24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 DCAKDQ8WVC6 231 aa24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 CMTM7Q96FZ5 175 aa24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 ACTR8Q9H981 624 aa24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 LYRM4Q9HD34 91 aa24.77■■□□□ 1.56
CDKN2A-201ENST00000304494 EXOC1LA0A1B0GW35 172 aa24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 CDK2AP1O14519 115 aa24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 UGDHO60701 494 aa24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 ABHD2P08910 425 aa24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 TERF2Q15554 542 aa24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 LGSNQ5TDP6 509 aa24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 PLD6Q8N2A8 252 aaKnown RBP24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 REPS1Q96D71 796 aa24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 UTP23Q9BRU9 249 aaKnown RBP24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 OLAHQ9NV23 265 aa24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 TSC22D4Q9Y3Q8 395 aa24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 PCDHGA11Q9Y5H2 935 aa24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 SCN2AQ99250 2005 aa24.76■■□□□ 1.55
CDKN2A-201ENST00000304494 TGFB1P01137 390 aa24.75■■□□□ 1.55
CDKN2A-201ENST00000304494 PIK3CBP42338 1070 aa24.75■■□□□ 1.55
CDKN2A-201ENST00000304494 PHEXP78562 749 aa24.75■■□□□ 1.55
CDKN2A-201ENST00000304494 GTF2H2Q13888 395 aa24.75■■□□□ 1.55
CDKN2A-201ENST00000304494 KHDRBS2Q5VWX1 349 aaKnown RBP24.75■■□□□ 1.55
CDKN2A-201ENST00000304494 GTF2H2CQ6P1K8 395 aa24.75■■□□□ 1.55
CDKN2A-201ENST00000304494 SCYL1Q96KG9 808 aa24.75■■□□□ 1.55
CDKN2A-201ENST00000304494 CENPKQ9BS16 269 aa24.75■■□□□ 1.55
CDKN2A-201ENST00000304494 IPPKQ9H8X2 491 aa24.75■■□□□ 1.55
CDKN2A-201ENST00000304494 SPACA6W5XKT8 324 aa24.75■■□□□ 1.55
CDKN2A-201ENST00000304494 TRIM49D1C9J1S8 452 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 CYR61O00622 381 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 E2F3O00716 465 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 SEMA7AO75326 666 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 RASAL1O95294 804 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 SNRPAP09012 282 aaKnown RBP24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 RHOXF2BP0C7M4 288 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 TUBA3CQ13748 450 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 AP5B1Q2VPB7 878 aa24.74■■□□□ 1.55
CDKN2A-201ENST00000304494 TUBA3EQ6PEY2 450 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms